diff test-data/samtools_flagstat_out1.txt @ 4:10b658bef71a draft

planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
author devteam
date Tue, 13 Oct 2015 12:54:34 -0400
parents 480404be9626
children 28eb6a47be96
line wrap: on
line diff
--- a/test-data/samtools_flagstat_out1.txt	Fri Sep 26 14:35:56 2014 -0400
+++ b/test-data/samtools_flagstat_out1.txt	Tue Oct 13 12:54:34 2015 -0400
@@ -1,13 +1,13 @@
-10 + 0 in total (QC-passed reads + QC-failed reads)
+200 + 0 in total (QC-passed reads + QC-failed reads)
 0 + 0 secondary
-0 + 0 supplimentary
+0 + 0 supplementary
 0 + 0 duplicates
-10 + 0 mapped (100.00%:-nan%)
-0 + 0 paired in sequencing
-0 + 0 read1
-0 + 0 read2
-0 + 0 properly paired (-nan%:-nan%)
+25 + 0 mapped (12.50%:nan%)
+200 + 0 paired in sequencing
+100 + 0 read1
+100 + 0 read2
+0 + 0 properly paired (0.00%:nan%)
 0 + 0 with itself and mate mapped
-0 + 0 singletons (-nan%:-nan%)
+25 + 0 singletons (12.50%:nan%)
 0 + 0 with mate mapped to a different chr
 0 + 0 with mate mapped to a different chr (mapQ>=5)