Mercurial > repos > devteam > samtools_flagstat
comparison test-data/samtools_flagstat_out1.txt @ 10:9b44224f5a76 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
| author | iuc |
|---|---|
| date | Tue, 28 Sep 2021 16:02:06 +0000 |
| parents | 28eb6a47be96 |
| children |
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| 9:5fbe9dcaef98 | 10:9b44224f5a76 |
|---|---|
| 1 200 + 0 in total (QC-passed reads + QC-failed reads) | 1 200 + 0 in total (QC-passed reads + QC-failed reads) |
| 2 200 + 0 primary | |
| 2 0 + 0 secondary | 3 0 + 0 secondary |
| 3 0 + 0 supplementary | 4 0 + 0 supplementary |
| 4 0 + 0 duplicates | 5 0 + 0 duplicates |
| 6 0 + 0 primary duplicates | |
| 5 25 + 0 mapped (12.50% : N/A) | 7 25 + 0 mapped (12.50% : N/A) |
| 8 25 + 0 primary mapped (12.50% : N/A) | |
| 6 200 + 0 paired in sequencing | 9 200 + 0 paired in sequencing |
| 7 100 + 0 read1 | 10 100 + 0 read1 |
| 8 100 + 0 read2 | 11 100 + 0 read2 |
| 9 0 + 0 properly paired (0.00% : N/A) | 12 0 + 0 properly paired (0.00% : N/A) |
| 10 0 + 0 with itself and mate mapped | 13 0 + 0 with itself and mate mapped |