Mercurial > repos > devteam > sam_to_bam
changeset 3:6bb1b0a4652f draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/samtools/sam_to_bam commit de7140295cce07e1bc1697e51dab4271c8d7a8a6
| author | devteam |
|---|---|
| date | Fri, 18 Dec 2015 19:42:41 -0500 |
| parents | 5a5f92086188 |
| children | 4afb4a5f0924 |
| files | macros.xml tool_dependencies.xml |
| diffstat | 2 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/macros.xml Tue Oct 13 12:53:53 2015 -0400 +++ b/macros.xml Fri Dec 18 19:42:41 2015 -0500 @@ -41,7 +41,7 @@ </citations> </xml> <xml name="version_command"> - <version_command>samtools --version | head -n 1 | awk '{ print $2 }'</version_command> + <version_command>echo $(samtools --version | head -n 1)", "$(samtools --version | grep -o -E "htslib.*?")</version_command> </xml> <xml name="stdio"> <stdio>
--- a/tool_dependencies.xml Tue Oct 13 12:53:53 2015 -0400 +++ b/tool_dependencies.xml Fri Dec 18 19:42:41 2015 -0500 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> <package name="samtools" version="1.2"> - <repository changeset_revision="192f00129358" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="a55970300738" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>