diff test-data/pileup_parser.10col.20-3-yes-yes-yes-no.pileup.out @ 0:5c3984014c07 draft

Uploaded tool tarball.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/pileup_parser.10col.20-3-yes-yes-yes-no.pileup.out	Tue Aug 20 11:07:42 2013 -0400
@@ -0,0 +1,86 @@
+chrM	13	14	A	A	56	0	25	18	16	0	1	0	17	1
+chrM	18	19	T	T	55	0	25	20	0	0	1	18	19	1
+chrM	35	36	A	A	103	0	25	30	27	0	1	0	28	1
+chrM	58	59	A	A	50	0	24	16	12	1	0	0	13	1
+chrM	59	60	C	C	50	0	24	16	1	15	0	0	16	1
+chrM	157	158	A	G	117	117	19	62	0	0	56	0	56	56
+chrM	170	171	T	T	141	0	21	46	0	0	1	45	46	1
+chrM	172	173	A	A	130	0	20	42	36	1	0	0	37	1
+chrM	173	174	A	A	122	0	21	40	38	1	0	0	39	1
+chrM	187	188	A	A	36	0	21	13	11	0	1	0	12	1
+chrM	195	196	T	T	17	0	19	5	0	0	1	4	5	1
+chrM	284	285	G	G	34	0	15	11	0	0	10	1	11	1
+chrM	285	286	T	T	33	0	15	11	1	0	0	7	8	1
+chrM	303	304	G	G	41	0	18	13	1	0	11	0	12	1
+chrM	310	311	T	T	41	0	18	13	0	1	0	11	12	1
+chrM	347	348	T	T	4	0	20	3	1	0	0	2	3	1
+chrM	354	355	A	C	14	36	25	4	1	3	0	0	4	3
+chrM	355	356	T	C	39	39	25	4	0	4	0	0	4	4
+chrM	380	381	C	T	77	108	25	28	0	0	0	24	24	24
+chrM	383	384	A	A	76	0	25	30	25	1	0	0	26	1
+chrM	385	386	A	G	88	120	25	32	0	0	29	0	29	29
+chrM	414	415	C	T	75	75	25	16	0	0	0	15	15	15
+chrM	464	465	C	C	169	0	25	65	1	58	0	0	59	1
+chrM	468	469	T	T	207	0	25	66	0	0	1	56	57	1
+chrM	471	472	C	C	187	0	25	72	1	64	0	0	65	1
+chrM	490	491	C	C	212	0	23	79	0	73	0	1	74	1
+chrM	506	507	A	A	150	0	21	76	64	1	0	0	65	1
+chrM	510	511	C	C	213	0	21	72	1	68	0	0	69	1
+chrM	526	527	A	A	164	0	22	58	51	1	0	0	52	1
+chrM	527	528	A	A	164	0	22	58	48	0	1	0	49	1
+chrM	536	537	A	A	138	0	23	49	42	1	0	0	43	1
+chrM	557	558	T	T	83	0	23	27	0	0	1	23	24	1
+chrM	606	607	G	G	105	0	24	43	0	0	33	2	35	2
+chrM	618	619	T	T	117	0	24	48	0	1	0	34	35	1
+chrM	627	628	G	G	108	0	22	57	1	0	51	0	52	1
+chrM	659	660	C	C	166	0	19	58	1	53	0	0	54	1
+chrM	668	669	C	C	135	0	19	42	1	40	1	0	42	2
+chrM	713	714	A	A	127	0	23	96	90	1	0	0	91	1
+chrM	719	720	T	T	130	0	24	96	0	0	1	77	78	1
+chrM	736	737	A	A	98	0	24	98	87	1	0	0	88	1
+chrM	747	748	A	A	97	0	25	86	80	1	0	0	81	1
+chrM	749	750	A	A	93	0	25	77	71	2	0	0	73	2
+chrM	759	760	T	T	106	0	25	86	0	0	1	69	70	1
+chrM	762	763	A	A	99	0	25	83	76	1	0	0	77	1
+chrM	763	764	G	G	107	0	25	86	1	0	75	0	76	1
+chrM	764	765	G	G	88	0	25	77	0	0	68	1	69	1
+chrM	767	768	T	T	102	0	25	71	1	0	0	65	66	1
+chrM	777	778	G	G	108	0	25	63	0	0	58	1	59	1
+chrM	784	785	A	A	99	0	25	63	51	1	0	0	52	1
+chrM	790	791	G	G	155	0	25	60	0	0	55	1	56	1
+chrM	794	795	T	T	212	0	25	74	1	0	0	62	63	1
+chrM	807	808	C	C	226	0	22	132	1	110	0	0	111	1
+chrM	808	809	T	T	242	0	22	134	0	1	0	109	110	1
+chrM	809	810	A	A	243	0	22	144	128	0	1	0	129	1
+chrM	814	815	C	C	246	0	22	160	1	142	0	0	143	1
+chrM	815	816	A	A	255	0	22	169	159	0	1	0	160	1
+chrM	816	817	A	A	254	0	22	171	150	1	0	0	151	1
+chrM	819	820	A	A	255	0	22	183	157	0	0	1	158	1
+chrM	822	823	T	T	252	0	22	192	0	1	0	171	172	1
+chrM	825	826	A	A	255	0	22	198	177	0	1	0	178	1
+chrM	829	830	G	G	255	0	22	198	1	0	185	0	186	1
+chrM	837	838	G	G	255	0	22	169	0	0	160	1	161	1
+chrM	841	842	C	C	239	0	22	173	1	156	0	0	157	1
+chrM	856	857	C	C	254	0	23	124	1	114	0	0	115	1
+chrM	858	859	A	A	250	0	23	118	110	0	1	0	111	1
+chrM	859	860	A	A	255	0	23	115	101	1	0	0	102	1
+chrM	864	865	G	G	255	0	23	115	1	0	109	0	110	1
+chrM	866	867	A	A	224	0	23	105	81	1	0	0	82	1
+chrM	872	873	C	C	206	0	23	94	1	84	0	0	85	1
+chrM	873	874	A	A	208	0	23	94	80	1	0	0	81	1
+chrM	931	932	C	C	53	0	23	22	2	18	0	0	20	2
+chrM	936	937	C	C	98	0	24	31	1	21	0	0	22	1
+chrM	950	951	C	C	191	0	23	76	1	61	0	0	62	1
+chrM	951	952	A	A	223	0	24	81	78	2	0	0	80	2
+chrM	952	953	C	C	179	0	24	86	2	67	0	0	69	2
+chrM	956	957	T	T	237	0	23	110	0	0	1	91	92	1
+chrM	957	958	C	C	251	0	23	117	1	96	0	0	97	1
+chrM	966	967	A	A	246	0	23	125	119	1	0	0	120	1
+chrM	974	975	C	C	255	0	23	125	1	111	1	0	113	2
+chrM	980	981	C	C	247	0	23	123	0	111	1	0	112	1
+chrM	981	982	C	C	255	0	23	122	2	106	0	0	108	2
+chrM	982	983	C	C	252	0	23	122	1	105	0	0	106	1
+chrM	983	984	A	A	250	0	23	119	105	1	0	0	106	1
+chrM	987	988	A	A	243	0	23	94	79	1	0	0	80	1
+chrM	1005	1006	C	C	138	0	18	49	1	43	0	0	44	1
+chrM	1025	1026	G	G	19	0	8	33	0	0	31	1	32	1