view cleansamwrapper.sh @ 148:b6662c2c8d64 draft

modified version number of downsamplesam to make toolshed aware that it has been modified
author Rayan Chikhi <chikhi@psu.edu>
date Mon, 21 Jul 2014 16:07:50 -0400
parents 8b335563c71a
children
line wrap: on
line source

java -jar $JAVA_JAR_PATH/CleanSam.jar QUIET=True INPUT=$1 OUTPUT=$2.sam
mv $2.sam $2