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annotate cleansamwrapper.sh @ 152:51fd923aa0ab draft

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author rayan
date Mon, 21 Jul 2014 16:33:33 -0400
parents 8b335563c71a
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0
8b335563c71a Uploaded
devteam
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1 java -jar $JAVA_JAR_PATH/CleanSam.jar QUIET=True INPUT=$1 OUTPUT=$2.sam
8b335563c71a Uploaded
devteam
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diff changeset
2 mv $2.sam $2