Mercurial > repos > devteam > picard

changeset 1:ab5e8beab4fe draft

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Uploaded corrected tool dependency definition.
author devteam
date Tue, 17 Dec 2013 16:12:31 -0500
parents ff4ec13e496e
children 93ace7e49295
files tool_dependencies.xml
diffstat 1 files changed, 1 insertions(+), 16 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Oct 23 10:49:35 2012 -0400
+++ b/tool_dependencies.xml	Tue Dec 17 16:12:31 2013 -0500
@@ -1,21 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="picard" version="1.56.0">
-        <install version="1.0">
-            <actions>
-                <action type="shell_command">mkdir picard</action>
-                <action type="shell_command">wget --quiet -O picard-tools-1.56.zip http://downloads.sourceforge.net/project/picard/picard-tools/1.56/picard-tools-1.56.zip</action>
-                <action type="shell_command">unzip picard-tools-1.56.zip</action>
-                <action type="move_directory_files">
-                    <source_directory>picard-tools-1.56</source_directory>
-                    <destination_directory>$INSTALL_DIR/jars</destination_directory>
-                </action>
-                <action type="set_environment">
-                    <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/jars</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>
-        </readme>
+        <repository changeset_revision="7206dbf34dcd" name="package_picard_1_56_0" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>