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diff picard_SamToFastq.xml @ 15:a5a13ea16d17 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 5ebd6c8453b49dd6a36e372eb1eb6e323bb7ad8a
author iuc
date Tue, 19 Jun 2018 11:28:30 -0400
parents 486d7500da69
children 1181366ba593
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--- a/picard_SamToFastq.xml	Mon Apr 16 21:27:09 2018 -0400
+++ b/picard_SamToFastq.xml	Tue Jun 19 11:28:30 2018 -0400
@@ -2,7 +2,7 @@
   <description>extract reads and qualities from SAM/BAM dataset and convert to fastq</description>
   <macros>
     <import>picard_macros.xml</import>
-    <token name="@WRAPPER_VERSION@">0</token>
+    <token name="@WRAPPER_VERSION@">1</token>
   </macros>
   <expand macro="requirements" />
   <command detect_errors="exit_code"><![CDATA[
@@ -51,6 +51,7 @@
     VALIDATION_STRINGENCY="${validation_stringency}"
     QUIET=true
     VERBOSITY=ERROR
+    @TMPDIR_OPTION@
 
   ]]></command>
   <inputs>