Mercurial > repos > devteam > picard
diff test-data/picard_CollectBaseDistributionByCycle_test1.tab @ 3:52fdfc45590a draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 00a7926c285bc4a339bd7deebf40b28f39c7d947-dirty
author | devteam |
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date | Thu, 16 Jul 2015 15:32:31 -0400 |
parents | |
children | 486d7500da69 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/picard_CollectBaseDistributionByCycle_test1.tab Thu Jul 16 15:32:31 2015 -0400 @@ -0,0 +1,511 @@ +## htsjdk.samtools.metrics.StringHeader +# picard.analysis.CollectBaseDistributionByCycle CHART_OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_660.dat ALIGNED_READS_ONLY=true PF_READS_ONLY=true INPUT=/Users/anton/galaxy-central/database/files/000/dataset_616.dat OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_659.dat REFERENCE_SEQUENCE=/Users/anton/temp/mt.fa ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false +## htsjdk.samtools.metrics.StringHeader +# Started on: Fri Oct 03 10:05:03 EDT 2014 + +## METRICS CLASS picard.analysis.BaseDistributionByCycleMetrics +READ_END CYCLE PCT_A PCT_C PCT_G PCT_T PCT_N +1 1 21 22 29 28 0 +1 2 49 13 12 26 0 +1 3 35 22 13 30 0 +1 4 28 20 13 39 0 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