Mercurial > repos > devteam > picard
comparison picard_SortSam.xml @ 28:c943f4a04af0 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
| author | iuc |
|---|---|
| date | Mon, 25 Sep 2023 08:31:14 +0000 |
| parents | a5a13ea16d17 |
| children |
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| 27:fdca9493e09b | 28:c943f4a04af0 |
|---|---|
| 19 INPUT='$escaped_element_identifier' | 19 INPUT='$escaped_element_identifier' |
| 20 OUTPUT='${output}' | 20 OUTPUT='${output}' |
| 21 SORT_ORDER="${sort_order}" | 21 SORT_ORDER="${sort_order}" |
| 22 QUIET=true | 22 QUIET=true |
| 23 VERBOSITY=ERROR | 23 VERBOSITY=ERROR |
| 24 @TMPDIR_OPTION@ | |
| 25 VALIDATION_STRINGENCY=${validation_stringency} | 24 VALIDATION_STRINGENCY=${validation_stringency} |
| 26 ]]></command> | 25 ]]></command> |
| 27 | 26 |
| 28 <inputs> | 27 <inputs> |
| 29 <param name="inputFile" type="data" format="sam,bam" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> | 28 <param name="inputFile" type="data" format="sam,bam" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> |