Mercurial > repos > devteam > picard
comparison picard_RevertSam.xml @ 28:c943f4a04af0 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
author | iuc |
---|---|
date | Mon, 25 Sep 2023 08:31:14 +0000 |
parents | a5a13ea16d17 |
children |
comparison
equal
deleted
inserted
replaced
27:fdca9493e09b | 28:c943f4a04af0 |
---|---|
28 | 28 |
29 SORT_ORDER="${sort_order}" | 29 SORT_ORDER="${sort_order}" |
30 VALIDATION_STRINGENCY="${validation_stringency}" | 30 VALIDATION_STRINGENCY="${validation_stringency}" |
31 QUIET=true | 31 QUIET=true |
32 VERBOSITY=ERROR | 32 VERBOSITY=ERROR |
33 @TMPDIR_OPTION@ | |
34 | 33 |
35 ]]></command> | 34 ]]></command> |
36 <inputs> | 35 <inputs> |
37 <param format="sam,bam" name="inputFile" type="data" multiple="True" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> | 36 <param format="sam,bam" name="inputFile" type="data" multiple="True" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> |
38 <param name="restore_original_qualities" type="boolean" checked="True" label="Restore original qualities from the OQ field to the QUAL field if available" help="RESTORE_ORIGINAL_QUALITIES; default=True"/> | 37 <param name="restore_original_qualities" type="boolean" checked="True" label="Restore original qualities from the OQ field to the QUAL field if available" help="RESTORE_ORIGINAL_QUALITIES; default=True"/> |