Mercurial > repos > devteam > picard
comparison picard_NormalizeFasta.xml @ 28:c943f4a04af0 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
| author | iuc |
|---|---|
| date | Mon, 25 Sep 2023 08:31:14 +0000 |
| parents | a5a13ea16d17 |
| children |
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| 27:fdca9493e09b | 28:c943f4a04af0 |
|---|---|
| 20 LINE_LENGTH="${line_length}" | 20 LINE_LENGTH="${line_length}" |
| 21 TRUNCATE_SEQUENCE_NAMES_AT_WHITESPACE="${truncate_sequence_names_at_whitespaces}" | 21 TRUNCATE_SEQUENCE_NAMES_AT_WHITESPACE="${truncate_sequence_names_at_whitespaces}" |
| 22 | 22 |
| 23 QUIET=true | 23 QUIET=true |
| 24 VERBOSITY=ERROR | 24 VERBOSITY=ERROR |
| 25 @TMPDIR_OPTION@ | |
| 26 | 25 |
| 27 ]]></command> | 26 ]]></command> |
| 28 <inputs> | 27 <inputs> |
| 29 <param format="fasta" name="inputFile" type="data" label="FASTA dataset or dataset collection" help="If empty, upload or import a FASTA dataset" /> | 28 <param format="fasta" name="inputFile" type="data" label="FASTA dataset or dataset collection" help="If empty, upload or import a FASTA dataset" /> |
| 30 <param name="line_length" type="integer" value="100" min="1" max="200" label="The line length to be used for the output fasta file" help="LINE_LENGTH; default=100"/> | 29 <param name="line_length" type="integer" value="100" min="1" max="200" label="The line length to be used for the output fasta file" help="LINE_LENGTH; default=100"/> |