Mercurial > repos > devteam > picard
comparison picard_DownsampleSam.xml @ 28:c943f4a04af0 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
| author | iuc |
|---|---|
| date | Mon, 25 Sep 2023 08:31:14 +0000 |
| parents | a5a13ea16d17 |
| children |
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| 27:fdca9493e09b | 28:c943f4a04af0 |
|---|---|
| 14 OUTPUT="${outFile}" | 14 OUTPUT="${outFile}" |
| 15 PROBABILITY=${probability} | 15 PROBABILITY=${probability} |
| 16 RANDOM_SEED=${seed} | 16 RANDOM_SEED=${seed} |
| 17 QUIET=true | 17 QUIET=true |
| 18 VERBOSITY=ERROR | 18 VERBOSITY=ERROR |
| 19 @TMPDIR_OPTION@ | |
| 20 VALIDATION_STRINGENCY=${validation_stringency} | 19 VALIDATION_STRINGENCY=${validation_stringency} |
| 21 ]]></command> | 20 ]]></command> |
| 22 <inputs> | 21 <inputs> |
| 23 <param format="sam,bam" name="inputFile" type="data" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM or BAM dataset" /> | 22 <param format="sam,bam" name="inputFile" type="data" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM or BAM dataset" /> |
| 24 <param name="probability" type="float" min="0.0" max="1.0" label="Probability (between 0 and 1) that any given read will be kept" help="PROBABILITY; specify 1 to keep all reads, 0.1 to keep 10% of the reads" value="1" /> | 23 <param name="probability" type="float" min="0.0" max="1.0" label="Probability (between 0 and 1) that any given read will be kept" help="PROBABILITY; specify 1 to keep all reads, 0.1 to keep 10% of the reads" value="1" /> |