Mercurial > repos > devteam > picard
comparison picard_CleanSam.xml @ 28:c943f4a04af0 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
| author | iuc |
|---|---|
| date | Mon, 25 Sep 2023 08:31:14 +0000 |
| parents | a5a13ea16d17 |
| children |
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| 27:fdca9493e09b | 28:c943f4a04af0 |
|---|---|
| 12 CleanSam | 12 CleanSam |
| 13 INPUT='$escaped_element_identifier' | 13 INPUT='$escaped_element_identifier' |
| 14 OUTPUT="${outFile}" | 14 OUTPUT="${outFile}" |
| 15 QUIET=true | 15 QUIET=true |
| 16 VERBOSITY=ERROR | 16 VERBOSITY=ERROR |
| 17 @TMPDIR_OPTION@ | |
| 18 VALIDATION_STRINGENCY=${validation_stringency} | 17 VALIDATION_STRINGENCY=${validation_stringency} |
| 19 ]]></command> | 18 ]]></command> |
| 20 | 19 |
| 21 <inputs> | 20 <inputs> |
| 22 <param name="inputFile" type="data" format="sam,bam" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> | 21 <param name="inputFile" type="data" format="sam,bam" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> |