Mercurial > repos > devteam > picard
comparison picard_FixMateInformation.xml @ 14:486d7500da69 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 7036343b9ac0a0ffc2ce4f6db465b9298ef05e73
author | iuc |
---|---|
date | Mon, 16 Apr 2018 21:27:09 -0400 |
parents | e417b1d6288d |
children | a5a13ea16d17 |
comparison
equal
deleted
inserted
replaced
13:c7dd8d7946b8 | 14:486d7500da69 |
---|---|
1 <tool name="FixMateInformation" id="picard_FixMateInformation" version="@TOOL_VERSION@.0"> | 1 <tool name="FixMateInformation" id="picard_FixMateInformation" version="@TOOL_VERSION@.@WRAPPER_VERSION@"> |
2 <description>ensure that all mate-pair information is in sync between each read and it's mate pair</description> | 2 <description>ensure that all mate-pair information is in sync between each read and it's mate pair</description> |
3 <macros> | 3 <macros> |
4 <import>picard_macros.xml</import> | 4 <import>picard_macros.xml</import> |
5 <token name="@WRAPPER_VERSION@">0</token> | |
5 </macros> | 6 </macros> |
6 <expand macro="requirements" /> | 7 <expand macro="requirements" /> |
7 <command detect_errors="exit_code"><![CDATA[ | 8 <command detect_errors="exit_code"><![CDATA[ |
8 @java_options@ | 9 @java_options@ |
9 picard | 10 picard |
70 MC=Boolean Adds the mate CIGAR tag (MC) if true, does not if false. Default value: true. | 71 MC=Boolean Adds the mate CIGAR tag (MC) if true, does not if false. Default value: true. |
71 | 72 |
72 @more_info@ | 73 @more_info@ |
73 | 74 |
74 </help> | 75 </help> |
76 <expand macro="citations" /> | |
75 </tool> | 77 </tool> |
76 | |
77 |