Mercurial > repos > devteam > package_velvet_1_2_10

annotate tool_dependencies.xml @ 0:d9e36a5fd0ea draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 11:13:59 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
1 <tool_dependency>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
2 <package name="velvet" version="1.2.10">
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
3 <install version="1.0">
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
4 <actions>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
5 <action type="download_by_url">https://github.com/dzerbino/velvet/archive/d430f1ade319af582dc7bb6886ea904abd6337bd.zip</action>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
6 <action type="shell_command">make</action>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
7 <action type="move_file">
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
8 <source>velvetg</source>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
9 <destination>$INSTALL_DIR</destination>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
10 </action>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
11 <action type="move_file">
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
12 <source>velveth</source>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
13 <destination>$INSTALL_DIR</destination>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
14 </action>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
15 <action type="set_environment">
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
16 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
17 </action>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
18 </actions>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
19 </install>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
20 <readme>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
21 From the official readme:
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
22
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
23 ::
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
24
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
25 Velvet should function on any standard 64bit Linux environment with
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
26 gcc. A good amount of physical memory (12GB to start with, more is no luxury)
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
27 is recommended.
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
28
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
29 </readme>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
30 </package>
d9e36a5fd0ea planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_velvet_1_2_10 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
31 </tool_dependency>