Mercurial > repos > devteam > package_samtools_0_1_19
comparison tool_dependencies.xml @ 1:786e3000ca58 draft default tip
Uploaded new version from GH
| author | devteam |
|---|---|
| date | Mon, 10 Nov 2014 14:53:24 -0500 |
| parents | 233326db3402 |
| children |
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| 0:233326db3402 | 1:786e3000ca58 |
|---|---|
| 21 <action type="download_by_url">http://depot.galaxyproject.org/package/source/samtools/samtools-0.1.19.tar.bz2</action> | 21 <action type="download_by_url">http://depot.galaxyproject.org/package/source/samtools/samtools-0.1.19.tar.bz2</action> |
| 22 <action type="shell_command">sed -i.bak 's/-lcurses/-lncurses/' Makefile</action> | 22 <action type="shell_command">sed -i.bak 's/-lcurses/-lncurses/' Makefile</action> |
| 23 <action type="shell_command">make</action> | 23 <action type="shell_command">make</action> |
| 24 <action type="move_file"> | 24 <action type="move_file"> |
| 25 <source>samtools</source> | 25 <source>samtools</source> |
| 26 <destination>$INSTALL_DIR/bin</destination> | |
| 27 </action> | |
| 28 <action type="move_file"> | |
| 29 <source>bcftools/bcftools</source> | |
| 30 <destination>$INSTALL_DIR/bin</destination> | |
| 31 </action> | |
| 32 <action type="move_file"> | |
| 33 <source>bcftools/vcfutils.pl</source> | |
| 26 <destination>$INSTALL_DIR/bin</destination> | 34 <destination>$INSTALL_DIR/bin</destination> |
| 27 </action> | 35 </action> |
| 28 <action type="move_file"> | 36 <action type="move_file"> |
| 29 <source>libbam.a</source> | 37 <source>libbam.a</source> |
| 30 <destination>$INSTALL_DIR/lib</destination> | 38 <destination>$INSTALL_DIR/lib</destination> |