comparison tool_dependencies.xml @ 2:3f8eeecabf16 draft default tip

Uploaded updated tool dependency recipe.
author devteam
date Tue, 24 Sep 2013 13:49:19 -0400
parents e28dc3aa1665
children
comparison
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1:e28dc3aa1665 2:3f8eeecabf16
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="libgtextutils" version="0.6"> 3 <package name="libgtextutils" version="0.6">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_by_url">http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.tar.bz2</action> 6 <action type="download_by_url">http://depot.galaxyproject.org/package/source/fastx_toolkit/libgtextutils-0.6.tar.bz2</action>
7 <!-- Some versions of GCC warn about a variable being set but not used, and fail due to -Werror --> 7 <!-- Some versions of GCC warn about a variable being set but not used, and fail due to -Werror -->
8 <action type="shell_command">./configure --prefix=$INSTALL_DIR --disable-wall</action> 8 <action type="shell_command">./configure --prefix=$INSTALL_DIR --disable-wall</action>
9 <action type="shell_command">make &amp;&amp; make install</action> 9 <action type="shell_command">make &amp;&amp; make install</action>
10 <action type="set_environment"> 10 <action type="set_environment">
11 <environment_variable name="GTEXTUTILS_CFLAGS" action="set_to">$INSTALL_DIR/include/gtextutils</environment_variable> 11 <environment_variable name="GTEXTUTILS_CFLAGS" action="set_to">$INSTALL_DIR/include/gtextutils</environment_variable>