Mercurial > repos > devteam > package_freebayes_0_9_20_b040236

changeset 0:4fe037b74be9 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_freebayes_0_9_20_b040236 commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 11:00:11 -0500
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 28 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Nov 09 11:00:11 2015 -0500
@@ -0,0 +1,28 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="freebayes" version="0_9_20_b040236">
+        <install version="1.0">
+            <actions_group>
+                <actions architecture="x86_64" os="linux">
+                    <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/freebayes/freebayes-0.9.20_b040236.tar.gz</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>       
+                </actions>                
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions_group>
+        </install>
+        <readme>
+	  Starting from version freebayes-0.9.14 freebayes is distributed through ToolShed only as pre-compiled x86_64 linux binaries.
+	  This tarball contains two binaries:
+	  
+	  bamleftalign
+	  freebayes
+	  
+	  Corresponding freebayes release 0.9.20 (b040236)
+        </readme>
+    </package>
+</tool_dependency>