Mercurial > repos > devteam > package_fastx_toolkit_0_0_13

changeset 2:b2814057f286 draft

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Uploaded tool dependency definition with architecture-dependent installation recipes.
author devteam
date Fri, 30 Aug 2013 13:51:25 -0400
parents 1cd326991d32
children 7d6cc3605cee
files tool_dependencies.xml
diffstat 1 files changed, 41 insertions(+), 11 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Aug 20 10:07:39 2013 -0400
+++ b/tool_dependencies.xml	Fri Aug 30 13:51:25 2013 -0400
@@ -1,23 +1,53 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="libgtextutils" version="0.6">
-        <repository changeset_revision="63bbde086e11" name="package_libgtextutils_0_6" owner="devteam" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="e28dc3aa1665" name="package_libgtextutils_0_6" owner="devteam" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="fastx_toolkit" version="0.0.13">
         <install version="1.0">
-            <actions>
-                <action type="download_by_url">http://hannonlab.cshl.edu/fastx_toolkit/fastx_toolkit-0.0.13.tar.bz2</action>
-                <action type="set_environment_for_install">
-                    <repository changeset_revision="63bbde086e11" name="package_libgtextutils_0_6" owner="devteam" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu">
-                        <package name="libgtextutils" version="0.6" />
-                    </repository>
-                </action>
-                <action type="shell_command">./configure --prefix=$INSTALL_DIR</action>
-                <action type="shell_command">make &amp;&amp; make install</action>
+            <actions_group>
+                <actions architecture="x86_64" os="linux">
+                    <action type="download_by_url">http://hannonlab.cshl.edu/fastx_toolkit/fastx_toolkit_0.0.13_binaries_Linux_2.6_amd64.tar.bz2</action>
+                    <action type="move_directory_files">
+                        <source_directory>./bin</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions>
+                <actions architecture="i386" os="linux">
+                    <action type="download_by_url">http://hannonlab.cshl.edu/fastx_toolkit/fastx_toolkit_0.0.13_binaries_Linux_2.6_i686.tar.bz2</action>
+                    <action type="move_directory_files">
+                        <source_directory>./bin</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions>
+                <actions architecture="i686" os="linux">
+                    <action type="download_by_url">http://hannonlab.cshl.edu/fastx_toolkit/fastx_toolkit_0.0.13_binaries_Linux_2.6_i686.tar.bz2</action>
+                    <action type="move_directory_files">
+                        <source_directory>./bin</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions>
+                <actions architecture="i386" os="darwin">
+                    <action type="download_by_url">http://hannonlab.cshl.edu/fastx_toolkit/fastx_toolkit_0.0.13_binaries_MacOSX.10.5.8_i386.tar.bz2</action>
+                    <action type="move_directory_files">
+                        <source_directory>./bin</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions>
+                <actions>
+                    <action type="download_by_url">http://hannonlab.cshl.edu/fastx_toolkit/fastx_toolkit-0.0.13.tar.bz2</action>
+                    <action type="set_environment_for_install">
+                        <repository name="package_libgtextutils_0_6" owner="devteam" prior_installation_required="True">
+                            <package name="libgtextutils" version="0.6" />
+                        </repository>
+                    </action>
+                    <action type="shell_command">./configure --prefix=$INSTALL_DIR --disable-wall</action>
+                    <action type="shell_command">make &amp;&amp; make install</action>
+                </actions>
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                 </action>
-            </actions>
+            </actions_group>
         </install>
         <readme>
         </readme>