view tool_dependencies.xml @ 0:1998f063e5ef draft default tip

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author devteam
date Wed, 18 Mar 2015 14:43:31 -0400
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<?xml version="1.0"?>
<tool_dependency>
    <package name="bwa" version="0.7.10.039ea20639">
        <install version="1.0">
            <actions_group>
                <actions architecture="x86_64" os="linux">
                    <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/bwa/bwa-0.7.10.039ea20639.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>.</source_directory>
                        <destination_directory>$INSTALL_DIR</destination_directory>
                    </action>       
                </actions>                
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions_group>
        </install>
        <readme>
Binary files in this package are compiled from github source code version 039ea20639
This is package dependency for tools relying on bwa mapper package. This package is distributed as x86_64 binaries only. These binaries should work on any of our stated supported linux platforms other than RHEL/CentOS 5.
        </readme>
    </package>
</tool_dependency>