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1 <?xml version='1.0' encoding='utf-8'?>
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2 <tool_dependency>
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3 <package name="blast+" version="2.2.26+">
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4 <install version="1.0">
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5 <actions_group>
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6 <!-- Download the binaries for BLAST+ compatible with 64-bit OSX. -->
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7 <actions os="darwin" architecture="x86_64">
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8 <action type="download_by_url" target_filename="ncbi-blast-2.2.26+.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-universal-macosx.tar.gz</action>
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9 <action type="move_directory_files">
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10 <source_directory>bin</source_directory>
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11 <destination_directory>$INSTALL_DIR</destination_directory>
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12 </action>
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13 </actions>
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14 <!-- Download the binaries for BLAST+ compatible with 32-bit OSX. -->
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15 <actions os="darwin" architecture="i386">
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16 <action type="download_by_url" target_filename="ncbi-blast-2.2.26+.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-universal-macosx.tar.gz</action>
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17 <action type="move_directory_files">
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18 <source_directory>bin</source_directory>
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19 <destination_directory>$INSTALL_DIR</destination_directory>
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20 </action>
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21 </actions>
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22 <!-- Download the binaries for BLAST+ compatible with 64-bit Linux. -->
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23 <actions os="linux" architecture="x86_64">
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24 <action type="download_by_url" target_filename="ncbi-blast-2.2.26+.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-x64-linux.tar.gz</action>
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25 <action type="move_directory_files">
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26 <source_directory>bin</source_directory>
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27 <destination_directory>$INSTALL_DIR</destination_directory>
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28 </action>
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29 </actions>
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30 <!-- Download the binaries for BLAST+ compatible with 32-bit Linux (i386). -->
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31 <actions os="linux" architecture="i386">
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32 <action type="download_by_url" target_filename="ncbi-blast-2.2.26+.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-ia32-linux.tar.gz</action>
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33 <action type="move_directory_files">
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34 <source_directory>bin</source_directory>
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35 <destination_directory>$INSTALL_DIR</destination_directory>
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36 </action>
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37 </actions>
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38 <!-- Download the binaries for BLAST+ compatible with 32-bit Linux (i686). -->
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39 <actions os="linux" architecture="i686">
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40 <action type="download_by_url" target_filename="ncbi-blast-2.2.26+.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-ia32-linux.tar.gz</action>
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41 <action type="move_directory_files">
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42 <source_directory>bin</source_directory>
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43 <destination_directory>$INSTALL_DIR</destination_directory>
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44 </action>
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45 </actions>
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46 <!-- This actions tag is only processed if none of the above tags resulted in a successful installation. -->
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47 <actions>
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48 <action type="download_by_url" target_filename="ncbi-blast-2.2.26+.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-src.tar.gz</action>
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49 <action type="shell_command">cd c++ && ./configure --prefix=$INSTALL_DIR && make && make install</action>
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50 </actions>
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51 <!-- The $PATH environment variable is only set if one of the above <actions> tags resulted in a successful installation. -->
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52 <action type="set_environment">
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53 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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54 </action>
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55 </actions_group>
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56 </install>
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57 <readme>
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58 These links provide information for building the NCBI Blast+ package in most environments.
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59
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60 System requirements
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61 http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download
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62 </readme>
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63 </package>
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64 </tool_dependency> |
