Mercurial > repos > devteam > package_bamtools_2_3_0_2d7685d2ae

annotate tool_dependencies.xml @ 1:f1ce7a19eb68 draft default tip

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author bgruening
date Thu, 16 Jul 2015 05:50:45 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="bamtools" version="2.3.0_2d7685d2ae">
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4 <install version="1.0">
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5 <actions_group>
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6 <actions architecture="x86_64" os="linux">
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7 <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/bamtools/bamtools-2.3.0_2d7685d2ae.tar.gz</action>
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8 <action type="move_directory_files">
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9 <source_directory>.</source_directory>
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10 <destination_directory>$INSTALL_DIR</destination_directory>
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11 </action>
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12 </actions>
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13 <action type="set_environment">
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14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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15 <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/lib</environment_variable>
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16 <environment_variable name="BAMTOOLS_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
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17 <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable>
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18 <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable>
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19 </action>
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20 </actions_group>
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21 </install>
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22 <readme>
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23 Binary files in this package are compiled from source code version 2d7685d2ae
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24 This is package dependency for tools relying on bamtools toolkit developed by by Derek Barnett (https://github.com/pezmaster31/bamtools). This package is distributed as x86_64 binaries only. These binaries should work on any of our stated supported linux platforms other than RHEL/CentOS 5.
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25 </readme>
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26 </package>
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27 </tool_dependency>