# HG changeset patch
# User peterjc
# Date 1530392470 14400
# Node ID 8f82e05831dc5f4128787a04f6efd74e27070592
# Parent  42e6f199d11f5d81722c3459db1adcf42f376cef
v0.3.0 Updated for NCBI BLAST+ 2.7.1

diff -r 42e6f199d11f -r 8f82e05831dc tools/ncbi_blast_plus/ncbi_makeprofiledb.xml
--- a/tools/ncbi_blast_plus/ncbi_makeprofiledb.xml	Sat Jun 30 15:13:38 2018 -0400
+++ b/tools/ncbi_blast_plus/ncbi_makeprofiledb.xml	Sat Jun 30 17:01:10 2018 -0400
@@ -69,10 +69,6 @@
                 <param argument="-gapextend" type="integer" size="5" value="" label="Cost to extend a gap" />
                 <param argument="-scale" type="float" size="5" value="" label="PSSM scale factor" />
                 <expand macro="input_scoring_matrix" />
-                <param argument="-gapopen" type="integer" min="0"
-                    label="Cost to open a gap" />
-                <param argument="-gapextend" type="integer" min="0"
-                    label="Cost to extend a gap" />
             </when>
         </conditional>