Mercurial > repos > devteam > ncbi_blast_plus
annotate test-data/tblastn_four_human_vs_rhodopsin.html @ 6:856b73016ba1 draft
v0.1.05 - Update citation information now GigaScience paper is out
author | peterjc |
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date | Fri, 04 Sep 2015 09:45:13 -0400 |
parents | 432ea9614cc9 |
children | 0e86300e49c0 |
rev | line source |
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0
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1 <HTML> |
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2 <TITLE>BLAST Search Results</TITLE> |
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3 <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099"> |
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4 <PRE> |
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5 |
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6 <b>TBLASTN 2.2.30+</b> |
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7 |
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8 |
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9 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
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10 OS=Homo sapiens GN=ERP44 PE=1 SV=1 |
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11 |
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12 Length=406 |
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13 |
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14 <b>Subject=</b> gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA |
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15 |
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16 Length=1047 |
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17 |
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18 |
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19 ***** No hits found ***** |
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20 |
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21 |
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22 |
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23 Lambda K H a alpha |
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24 0.347 0.182 0.684 0.522 1.92 |
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25 |
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26 Gapped |
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27 Lambda K H a alpha sigma |
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28 0.299 0.0710 0.270 1.10 13.8 14.5 |
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29 |
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30 Effective search space used: 127710 |
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31 |
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32 |
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33 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
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34 OS=Homo sapiens GN=ERP44 PE=1 SV=1 |
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35 |
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36 Length=406 |
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37 |
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38 <b>Subject=</b> gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete |
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39 cds |
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40 |
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41 Length=1574 |
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42 |
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43 |
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44 ***** No hits found ***** |
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45 |
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46 |
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47 |
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48 Lambda K H a alpha |
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49 0.347 0.182 0.684 0.522 1.92 |
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50 |
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51 Gapped |
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52 Lambda K H a alpha sigma |
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53 0.299 0.0710 0.270 1.10 13.8 14.5 |
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54 |
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55 Effective search space used: 127710 |
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56 |
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57 |
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58 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
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59 OS=Homo sapiens GN=ERP44 PE=1 SV=1 |
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60 |
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61 Length=406 |
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62 |
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63 <b>Subject=</b> gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 |
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64 rhodopsin (RHO) gene, exons 1 through 5 and partial cds |
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65 |
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66 Length=4301 |
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67 |
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68 |
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69 ***** No hits found ***** |
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70 |
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71 |
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72 |
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73 Lambda K H a alpha |
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74 0.347 0.182 0.684 0.522 1.92 |
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75 |
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76 Gapped |
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77 Lambda K H a alpha sigma |
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78 0.299 0.0710 0.270 1.10 13.8 14.5 |
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79 |
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80 Effective search space used: 127710 |
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81 |
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82 |
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83 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
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84 OS=Homo sapiens GN=ERP44 PE=1 SV=1 |
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85 |
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86 Length=406 |
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87 |
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88 <b>Subject=</b> gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin |
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89 (RHO) mRNA, partial cds |
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90 |
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91 Length=983 |
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92 |
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93 |
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94 ***** No hits found ***** |
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95 |
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96 |
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97 |
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98 Lambda K H a alpha |
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99 0.347 0.182 0.684 0.522 1.92 |
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100 |
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101 Gapped |
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102 Lambda K H a alpha sigma |
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103 0.299 0.0710 0.270 1.10 13.8 14.5 |
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104 |
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105 Effective search space used: 127710 |
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106 |
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107 |
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108 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
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109 OS=Homo sapiens GN=ERP44 PE=1 SV=1 |
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110 |
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111 Length=406 |
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112 |
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113 <b>Subject=</b> gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for |
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114 rhodopsin, complete cds |
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115 |
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116 Length=1047 |
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117 |
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118 |
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119 ***** No hits found ***** |
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120 |
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121 |
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122 |
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peterjc
parents:
diff
changeset
|
123 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
124 0.347 0.182 0.684 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
125 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
126 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
127 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
128 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
129 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
130 Effective search space used: 127710 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
131 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
132 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
133 <b>Query=</b> sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
134 OS=Homo sapiens GN=ERP44 PE=1 SV=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
135 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
136 Length=406 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
137 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
138 <b>Subject=</b> gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
139 water form rod opsin, complete cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
140 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
141 Length=1344 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
142 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
143 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
144 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
145 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
146 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
147 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
148 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
149 0.347 0.182 0.684 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
150 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
151 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
152 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
153 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
154 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
155 Effective search space used: 127710 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
156 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
157 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
158 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
159 GN=BMP2K PE=1 SV=2 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
160 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
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|
161 Length=1161 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
162 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
163 <b>Subject=</b> gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
164 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
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|
165 Length=1047 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
166 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
167 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
168 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
169 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
170 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
171 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
172 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
173 0.334 0.170 0.615 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
174 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
175 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
176 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
177 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
178 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
179 Effective search space used: 370988 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
181 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
182 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
183 GN=BMP2K PE=1 SV=2 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
184 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
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|
185 Length=1161 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
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|
186 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
187 <b>Subject=</b> gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
188 cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
189 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
190 Length=1574 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
191 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
192 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
193 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
194 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
195 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
196 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
197 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
198 0.334 0.170 0.615 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
199 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
200 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
201 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
202 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
203 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
204 Effective search space used: 370988 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
205 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
206 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
207 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
208 GN=BMP2K PE=1 SV=2 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
209 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
210 Length=1161 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
211 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
212 <b>Subject=</b> gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
213 rhodopsin (RHO) gene, exons 1 through 5 and partial cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
214 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
215 Length=4301 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
216 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
217 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
218 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
219 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
220 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
221 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
222 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
223 0.334 0.170 0.615 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
224 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
225 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
226 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
227 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
228 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
229 Effective search space used: 370988 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
230 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
231 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
232 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
233 GN=BMP2K PE=1 SV=2 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
234 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
235 Length=1161 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
236 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
237 <b>Subject=</b> gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
238 (RHO) mRNA, partial cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
239 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
240 Length=983 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
241 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
242 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
243 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
244 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
245 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
246 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
247 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
248 0.334 0.170 0.615 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
249 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
250 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
251 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
252 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
253 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
254 Effective search space used: 370988 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
255 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
256 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
257 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
258 GN=BMP2K PE=1 SV=2 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
259 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
260 Length=1161 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
261 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
262 <b>Subject=</b> gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
263 rhodopsin, complete cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
264 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
265 Length=1047 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
266 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
267 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
268 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
269 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
270 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
271 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
272 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
273 0.334 0.170 0.615 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
274 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
275 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
276 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
277 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
278 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
279 Effective search space used: 370988 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
280 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
281 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
282 <b>Query=</b> sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
283 GN=BMP2K PE=1 SV=2 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
284 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
285 Length=1161 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
286 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
287 <b>Subject=</b> gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
288 water form rod opsin, complete cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
289 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
290 Length=1344 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
291 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
292 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
293 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
294 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
295 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
296 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
297 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
298 0.334 0.170 0.615 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
299 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
300 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
301 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
302 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
303 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
304 Effective search space used: 370988 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
305 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
306 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
307 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
308 SV=4 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
309 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
310 Length=1382 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
311 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
312 <b>Subject=</b> gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
313 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
314 Length=1047 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
315 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
316 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
317 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
318 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
319 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
320 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
321 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
322 0.346 0.180 0.700 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
323 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
324 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
325 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
326 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
327 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
328 Effective search space used: 441350 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
329 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
330 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
331 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
332 SV=4 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
333 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
334 Length=1382 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
335 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
336 <b>Subject=</b> gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
337 cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
338 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
339 Length=1574 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
340 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
341 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
342 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
343 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
344 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
345 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
346 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
347 0.346 0.180 0.700 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
349 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
350 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
351 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
352 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
353 Effective search space used: 441350 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
354 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
355 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
356 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
357 SV=4 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
358 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
359 Length=1382 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
360 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
361 <b>Subject=</b> gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
362 rhodopsin (RHO) gene, exons 1 through 5 and partial cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
363 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
364 Length=4301 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
365 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
366 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
367 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
368 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
369 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
370 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
371 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
372 0.346 0.180 0.700 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
373 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
374 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
375 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
376 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
377 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
378 Effective search space used: 441350 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
379 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
380 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
381 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
382 SV=4 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
383 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
384 Length=1382 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
385 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
386 <b>Subject=</b> gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
387 (RHO) mRNA, partial cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
388 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
389 Length=983 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
390 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
391 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
392 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
393 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
394 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
395 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
396 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
397 0.346 0.180 0.700 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
398 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
399 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
400 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
401 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
402 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
403 Effective search space used: 441350 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
404 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
405 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
406 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
407 SV=4 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
408 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
409 Length=1382 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
410 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
411 <b>Subject=</b> gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
412 rhodopsin, complete cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
413 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
414 Length=1047 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
415 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
416 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
417 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
418 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
419 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
420 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
421 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
422 0.346 0.180 0.700 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
423 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
424 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
425 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
426 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
427 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
428 Effective search space used: 441350 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
429 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
430 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
431 <b>Query=</b> sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
432 SV=4 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
433 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
434 Length=1382 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
435 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
436 <b>Subject=</b> gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
437 water form rod opsin, complete cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
438 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
439 Length=1344 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
440 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
441 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
442 ***** No hits found ***** |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
443 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
444 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
445 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
446 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
447 0.346 0.180 0.700 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
448 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
449 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
450 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
451 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
452 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
453 Effective search space used: 441350 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
454 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
455 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
456 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
457 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
458 Length=348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
459 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
460 <b>Subject=</b> gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
461 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
462 Length=1047 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
463 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
464 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
465 Score = 732 bits (1689), Expect = 0.0, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
466 Identities = 336/348 (97%), Positives = 343/348 (99%), Gaps = 0/348 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
467 Frame = +1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
468 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
469 Query 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
470 MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
471 Sbjct 1 MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
472 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
473 Query 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
474 VTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLG |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
475 Sbjct 181 VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG 360 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
476 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
477 Query 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
478 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIP |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
479 Sbjct 361 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP 540 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
480 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
481 Query 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
482 EG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQES |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
483 Sbjct 541 EGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQES 720 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
484 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
485 Query 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
486 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++I |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
487 Sbjct 721 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSI 900 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
488 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
489 Query 301 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA 348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
490 YNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
491 Sbjct 901 YNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA 1044 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
492 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
493 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
494 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
495 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
496 0.351 0.182 0.707 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
497 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
498 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
499 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
500 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
501 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
502 Effective search space used: 109230 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
503 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
504 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
505 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
506 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
507 Length=348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
508 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
509 <b>Subject=</b> gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
510 cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
511 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
512 Length=1574 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
513 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
514 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
515 Score = 646 bits (1489), Expect = 0.0, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
516 Identities = 290/342 (85%), Positives = 320/342 (94%), Gaps = 1/342 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
517 Frame = +3 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
518 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
519 Query 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
520 MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLY |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
521 Sbjct 42 MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLY 221 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
522 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
523 Query 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
524 VT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLG |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
525 Sbjct 222 VTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLG 401 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
526 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
527 Query 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
528 GEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIP |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
529 Sbjct 402 GEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIP 581 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
530 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
531 Query 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
532 EG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQES |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
533 Sbjct 582 EGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQES 761 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
534 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
535 Query 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
536 ATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++I |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
537 Sbjct 762 ATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSI 941 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
538 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
539 Query 301 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE 341 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
540 YNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
541 Sbjct 942 YNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE 1067 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
542 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
543 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
544 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
545 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
546 0.351 0.182 0.707 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
547 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
548 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
549 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
550 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
551 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
552 Effective search space used: 109230 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
553 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
554 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
555 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
556 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
557 Length=348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
558 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
559 <b>Subject=</b> gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
560 rhodopsin (RHO) gene, exons 1 through 5 and partial cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
561 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
562 Length=4301 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
563 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
564 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
565 Score = 151 bits (342), Expect(2) = 1e-72, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
566 Identities = 69/74 (93%), Positives = 73/74 (99%), Gaps = 0/74 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
567 Frame = +3 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
568 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
569 Query 239 ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSA 298 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
570 ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS+ |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
571 Sbjct 3147 ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSS 3326 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
572 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
573 Query 299 AIYNPVIYIMMNKQ 312 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
574 +IYNPVIYIMMNKQ |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
575 Sbjct 3327 SIYNPVIYIMMNKQ 3368 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
576 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
577 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
578 Score = 126 bits (284), Expect(2) = 1e-72, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
579 Identities = 54/59 (92%), Positives = 57/59 (97%), Gaps = 0/59 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
580 Frame = +2 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
581 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
582 Query 177 RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA 235 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
583 RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE + |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
584 Sbjct 2855 RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS 3031 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
585 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
586 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
587 Score = 229 bits (523), Expect = 9e-67, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
588 Identities = 107/111 (96%), Positives = 109/111 (98%), Gaps = 0/111 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
589 Frame = +1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
590 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
591 Query 11 VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT 70 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
592 VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
593 Sbjct 1 VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT 180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
594 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
595 Query 71 PLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG 121 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
596 PLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
597 Sbjct 181 PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG 333 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
598 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
599 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
600 Score = 122 bits (276), Expect = 1e-32, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
601 Identities = 55/59 (93%), Positives = 56/59 (95%), Gaps = 0/59 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
602 Frame = +3 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
603 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
604 Query 119 LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR 177 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
605 L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
606 Sbjct 1404 LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR 1580 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
607 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
608 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
609 Score = 57.7 bits (125), Expect = 2e-12, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
610 Identities = 23/26 (88%), Positives = 24/26 (92%), Gaps = 0/26 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
611 Frame = +1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
612 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
613 Query 312 QFRNCMLTTICCGKNPLGDDEASATV 337 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
614 QFRNCMLTT+CCGKNPLGDDEAS T |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
615 Sbjct 4222 QFRNCMLTTLCCGKNPLGDDEASTTA 4299 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
616 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
617 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
618 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
619 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
620 0.351 0.182 0.707 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
621 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
622 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
623 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
624 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
625 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
626 Effective search space used: 109230 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
627 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
628 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
629 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
630 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
631 Length=348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
632 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
633 <b>Subject=</b> gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
634 (RHO) mRNA, partial cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
635 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
636 Length=983 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
637 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
638 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
639 Score = 658 bits (1517), Expect = 0.0, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
640 Identities = 310/326 (95%), Positives = 322/326 (99%), Gaps = 0/326 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
641 Frame = +1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
642 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
643 Query 11 VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT 70 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
644 VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
645 Sbjct 1 VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT 180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
646 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
647 Query 71 PLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVV 130 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
648 PLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVV |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
649 Sbjct 181 PLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVV 360 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
650 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
651 Query 131 LAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGID 190 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
652 LAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGID |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
653 Sbjct 361 LAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGID 540 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
654 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
655 Query 191 YYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEV 250 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
656 YYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEV |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
657 Sbjct 541 YYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEV 720 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
658 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
659 Query 251 TRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMN 310 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
660 TRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMN |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
661 Sbjct 721 TRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMN 900 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
662 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
663 Query 311 KQFRNCMLTTICCGKNPLGDDEASAT 336 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
664 KQFRNCMLTT+CCGKNPLGDDEAS T |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
665 Sbjct 901 KQFRNCMLTTLCCGKNPLGDDEASTT 978 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
666 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
667 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
668 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
669 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
670 0.351 0.182 0.707 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
671 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
672 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
673 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
674 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
675 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
676 Effective search space used: 109230 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
677 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
678 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
679 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
680 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
681 Length=348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
682 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
683 <b>Subject=</b> gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
684 rhodopsin, complete cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
685 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
686 Length=1047 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
687 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
688 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
689 Score = 711 bits (1640), Expect = 0.0, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
690 Identities = 325/348 (93%), Positives = 337/348 (97%), Gaps = 0/348 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
691 Frame = +1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
692 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
693 Query 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
694 MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLY |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
695 Sbjct 1 MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLY 180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
696 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
697 Query 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
698 VTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLG |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
699 Sbjct 181 VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG 360 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
700 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
701 Query 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
702 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIP |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
703 Sbjct 361 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP 540 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
704 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
705 Query 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
706 EG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQES |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
707 Sbjct 541 EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES 720 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
708 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
709 Query 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
710 ATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+ |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
711 Sbjct 721 ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAV 900 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
712 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
713 Query 301 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA 348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
714 YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
715 Sbjct 901 YNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA 1044 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
716 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
717 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
718 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
719 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
720 0.351 0.182 0.707 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
721 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
722 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
723 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
724 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
725 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
726 Effective search space used: 109230 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
727 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
728 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
729 <b>Query=</b> sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
730 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
731 Length=348 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
732 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
733 <b>Subject=</b> gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
734 water form rod opsin, complete cds |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
735 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
736 Length=1344 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
737 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
738 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
739 Score = 626 bits (1444), Expect = 0.0, Method: Compositional matrix adjust. |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
740 Identities = 281/342 (82%), Positives = 311/342 (91%), Gaps = 1/342 (0%) |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
741 Frame = +2 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
742 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
743 Query 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
744 MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLY |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
745 Sbjct 23 MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLY 202 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
746 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
747 Query 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
748 VT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLG |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
749 Sbjct 203 VTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLG 382 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
750 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
751 Query 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
752 GEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV TW MALACA PPL GWSRYIP |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
753 Sbjct 383 GEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIP 562 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
754 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
755 Query 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
756 EGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
757 Sbjct 563 EGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQES 742 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
758 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
759 Query 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
760 TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+ |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
761 Sbjct 743 ETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSAL 922 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
762 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
763 Query 301 YNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE 341 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
764 YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
765 Sbjct 923 YNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE 1048 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
766 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
767 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
768 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
769 Lambda K H a alpha |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
770 0.351 0.182 0.707 0.522 1.92 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
771 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
772 Gapped |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
773 Lambda K H a alpha sigma |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
774 0.299 0.0710 0.270 1.10 13.8 14.5 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
775 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
776 Effective search space used: 109230 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
777 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
778 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
779 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
780 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
781 Matrix: BLOSUM80 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
782 Gap Penalties: Existence: 10, Extension: 1 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
783 Neighboring words threshold: 14 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
784 Window for multiple hits: 25 |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
785 </PRE> |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
786 </BODY> |
432ea9614cc9
Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
peterjc
parents:
diff
changeset
|
787 </HTML> |