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annotate test-data/rhodopsin_nucs.no_gi.fasta @ 13:4dcc9429d6d2 draft

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v0.2.00, updated to depend on BLAST+ 2.5.0
author peterjc
date Mon, 05 Dec 2016 13:58:24 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
13
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
1 >NM_001009242.1 Felis catus rhodopsin (RHO), mRNA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
2 ATGAACGGGACGGAGGGCCCGAACTTCTACGTGCCCTTCTCCAACAAAACGGGTGTGGTACGCAGCCCCTTCGAGTACCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
3 ACAGTACTACCTGGCTGAGCCATGGCAGTTCTCCATGCTGGCCGCCTACATGTTCCTGCTCATCGTGCTTGGCTTCCCCA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
4 TCAACTTCCTCACGCTCTACGTCACGGTCCAGCACAAGAAGCTGCGCACGCCTCTCAACTACATCCTGCTCAACCTGGCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
5 GTGGCTGACCTCTTCATGGTCTTCGGTGGCTTCACCACCACCCTCTACACCTCTCTGCATGGATACTTTGTCTTTGGGCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
6 CACAGGATGCAATTTGGAGGGCTTCTTTGCCACACTGGGCGGTGAAATTGCCCTGTGGTCTTTGGTGGTCCTGGCCATTG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
7 AGCGGTACGTGGTGGTGTGTAAGCCCATGAGCAACTTCCGCTTTGGGGAGAACCATGCCATAATGGGCGTCGCTTTCACC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
8 TGGGTCATGGCACTGGCCTGCGCTGCACCCCCCCTCGTTGGTTGGTCCAGGTACATCCCTGAAGGCATGCAGTGTTCATG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
9 CGGGATCGACTACTACACACTCAAGCCAGAAGTCAACAACGAGTCCTTTGTCATCTACATGTTCGTGGTCCACTTCACCA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
10 TCCCCATGATCGTCATCTTCTTTTGCTACGGGCAGCTTGTCTTCACAGTCAAGGAGGCGGCAGCCCAGCAGCAGGAGTCA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
11 GCCACCACCCAGAAGGCTGAGAAGGAGGTCACTCGCATGGTCATCATCATGGTCATTGCTTTCCTGATCTGTTGGGTGCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
12 CTACGCCAGCGTGGCATTCTACATCTTCACCCACCAGGGGTCCAACTTTGGCCCCATCTTCATGACACTCCCGGCGTTCT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
13 TCGCAAAGTCCTCCTCCATCTACAACCCTGTCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGCTCACTACC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
14 CTCTGCTGTGGCAAGAACCCACTGGGTGATGACGAGGCTTCCACAACCGGTTCCAAGACGGAGACCAGCCAGGTGGCACC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
15 GGCCTAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
16 >U59921.1 Bufo bufo rhodopsin mRNA, complete cds
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
17 TCTTTCTAGTTTGGGGGGGGGGACTTTAAAGAGCCGCCAATATGAACGGAACAGAAGGCCCAAACTTTTACATACCCATG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
18 TCCAACAAGACTGGGGTGGTGCGAAGCCCCTTTGAATACCCTCAGTATTACCTGGCAGAGCCATGGCAATATTCCATTCT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
19 GTGCGCGTACATGTTCCTGCTCATTCTACTTGGGTTCCCAATCAACTTCATGACCTTGTACGTCACCATCCAGCACAAGA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
20 AGCTCCGGACACCCTTAAACTATATCCTGCTGAATTTGGCCTTTGCCAACCACTTCATGGTCCTGTGTGGATTCACGGTG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
21 ACAATGTACTCCTCAATGAACGGATACTTCATCCTCGGAGCCACCGGTTGCTATGTTGAAGGCTTCTTCGCTACCCTTGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
22 TGGTGAAATCGCCCTTTGGTCCCTGGTGGTCTTGGCCATTGAACGATACGTGGTCGTCTGTAAGCCCATGAGCAACTTCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
23 GATTTAGTGAGAACCATGCCGTCATGGGCGTAGCGTTCACCTGGATAATGGCTTTGTCCTGTGCTGTTCCTCCACTCCTT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
24 GGATGGTCCAGGTACATCCCCGAGGGCATGCAGTGCTCCTGCGGAGTCGACTACTACACCCTGAAGCCCGAGGTCAACAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
25 CGAGTCCTTCGTCATCTACATGTTCGTCGTCCACTTCACCATCCCCCTGATTATCATTTTCTTCTGCTATGGCCGCCTGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
26 TGTGCACTGTGAAAGAGGCTGCAGCTCAACAGCAAGAGTCCGCCACCACCCAGAAGGCCGAGAAAGAGGTGACCAGGATG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
27 GTGATCATCATGGTGGTCTTCTTCCTTATCTGTTGGGTCCCCTACGCCTCTGTCGCTTTCTTCATCTTCAGCAATCAGGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
28 CTCTGAGTTCGGCCCCATCTTCATGACCGTCCCAGCTTTCTTTGCCAAGAGTTCTTCCATCTACAACCCCGTCATCTACA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
29 TCATGCTCAACAAGCAGTTCCGTAACTGCATGATCACCACCCTGTGCTGCGGCAAGAATCCCTTTGGAGAAGACGATGCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
30 TCCTCTGCCGCCACCTCCAAGACAGAGGCTTCTTCTGTTTCTTCCAGCCAGGTGTCTCCTGCATAAGACCTTCCACCAGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
31 CCTGTCTCAGGGTCCGCTGCCTCACACAGCTCCCACCGCCCCAACTCCGTCTCCTGCTCGCTAAGGCGGCGAAGTTCCCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
32 TTCCATTACATAAAACGTATCTGTTCAAGAAAGGCGACGACGAAGGAGAAGAAGAGGAGCCCCCCCGAACCCCTTCGCTG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
33 CTGCTGAAAACGACTTGATTGCTTCTGCAACGCAACGGGGCCTTACGGCAGCGAAGGGGTTGTCATCCGGACGCGCCAAG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
34 AATTCCTTCGAGACTGTAAATATCTTAAAGGAACCGTCCTGCTAGTTACCGACGCCGCTCCTGTAGCCGCCGTTCCCCCG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
35 CACTCCGGCCGGTTCATACCTCTTATTTTTTTGCAATGCAACAGAAAATAATATTTTTGTTCCCACGGCTTTTCCCGGTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
36 AGGTCTGGTAGTGGCGGAGATTGGCCGACCCCTCGCACCTGTAATAAAGCGCAG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
37 >GQ290303.1 Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
38 GTGCCCTTCTCCAACAAGACAGGCGTGGTGCGCAGTCCCTTCGAGCATCCACAGTACTACCTGGCCGAGCCATGGCAGTT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
39 CTCCATGCTGGCCGCCTACATGTTTCTGCTGATCGTGCTCGGCTTCCCCATCAACTTCCTCACGCTCTATGTCACGGTTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
40 AGCACAAGAAGCTGCGTACGCCTCTCAACTACATCCTGCTCAACCTGGCCGTGGCCGACCTCTTCATGGTCTTCGGAGGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
41 TTCACCACCACCCTCTACACCTCCCTGCATGGATACTTTGTCTTCGGGCCTACGGGATGCAATCTGGAGGGCTTTTTTGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
42 CACCCTGGGAGGTATGAGCTGAGATGCGGGTAAGGAGGAGGCATAGAGGCATCTGGGAACAGTCCCAAGCTTGGGGTGAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
43 GGCTAAGAGGCCTTCTTCCTTGTTCTGTCATTGGCGTCGTCCGAAGCCCTCACTTAATCAACAAACAGTTTGGTGGTGAG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
44 GCGCTGAGCTCCATTTGGAGAGGGCAGGTATCGAGCACTGTTTTATCCCCCCTGGAGTGGTGCCATTGCCTTGCTTTACA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
45 GCAAAGAAACTGAGGATGAGAGGAGTCGAGGGTCTTGCCAGGTCACATCATGGCAGAGACAGAGCTGAGTTTCAACCCTG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
46 CATCTATGTGCAGTTTCCCTTGGAGCAGCTATGTTAGGTCAGACCCACGGTGGGCACTGGGGAGAGAGCTGCACAAGACA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
47 GGTCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
48 NNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTGATTGCCAGGAGTGATGTGCAGCGCAAATGTCTGAATTCCATTATTAT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
49 GTGCTCCTTCTTCCTCTGAGCCAAACATCCATCTTCATGGCTCCTAGAATTGGGTCCCACCCACATGAGCAGGTCATTTT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
50 GTTTCCCTAGAGGGGAGAGGTCACTGCTGTGGAGGGAGGGAAGGTTCGTCCCGCTCCATGTTTCTGTTGTCTCTGCAATG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
51 CCTTTCTCTAGGGACTCTGCCTATTGCCCCAAGAAGGACACATTCTTCTGTAAAAACTCCCTCCTGGGTTCCCAGTCTAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
52 TCAAGACCTCTAAACTGATTTCCATGTCCCTCATGAACCCAAAGCTCTAACTGAATTAAACTTCTCAGGACTTACTCCAC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
53 TCTCCTCGTCCATCATGCAGCCCCTCTGCCCAGCACCCTATCTCCTCTTCTTCCCAGTGTCTGAGCCCACTGTACCCTGA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
54 GACTTCGCTCCAGGCCTGCCCCAGGCTGCCTTCTCAGGTGCCCTCTCCCACATAGGAGGAGCACGGCCTCCTTAGACAGA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
55 CGTGGGGTGCAGGTTGGTGGCATGCTGACTGATAGCTGACTGCCTTGCAGGTGAAATTGCCCTGTGGTCCTTGGTGGTCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
56 TGGCCATCGAGCGGTACGTGGTGGTATGCAAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCACGCCATCATGGGCCTT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
57 GCCCTCACCTGGGTCATGGCACTGGCCTGCGCCGCGCCCCCGCTAGTCGGCTGGTCCAGGTAATGGCACTGAACAGAAGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
58 GAAGTGCCTCTGAGGTCTTCTTAGGGTCCCCCAGCTGGGACTCAAACCTAGGGCTGTCTGGTTCCAGGCACGGAACTGGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
59 GACTCCACTGGGGTTGGGGTTTAGGGCAAGGAAGGAGAGGATCAGACCCTAATGTTGTTACGTGGGTTGGTCCGCATGTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
60 AAGGAGAATCCAAGACACCCAATCCTTCACCTTGGCTGTGCCCCTAATCCTCATCTAAGCCAGGTTCAGATTCCAATCCT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
61 CTTTGGCCCAGTGCTCCGTGGGAAGCTCCCTCTGACCTTGGGCCTCAGCGCCTGGGGTTGCTGAGCCTTCCTAGTATAGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
62 TGGTGACATCGTAGCCCCTGGGACCTGGATCCTGCCCAGTCTGCAGGCCATCATCTCCAAATGGGGCTGAGATGAGATGT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
63 GAGGAAAGAGGGGAGACAGTGGTTTGGAAAACTGGACTGGTGGCTTTTTTGGGTTTCCAGAGGACTCATCTTCCTCTGCT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
64 TCTAGAATATTCCCACTCTCTCTTCCCTTTCCTCATTCTTCCTGGGTTATTTTTTTTTCCCTTTGCTGAATTCGAGCCCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
65 ATTCCCTCCAGCCTCTTTCCCTGTCTTATCTAGCCCAGTCCAGTTATATTCTCATAGGCAGAGGCAACAGATGCTCCAAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
66 TTTTCTGAGGTCGGTTCCAACATCGCCACCCTCTAAAATCAGTGAAACATCCTAACTACATGCCTCATAGTCCTCCTGTT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
67 TCCAAAAACTGCAAAGATCTCCTGGTTACCCTGTATGCCCATCTTTGGGCTAGAAAATCCTCTCACCCTGTTAATAGTAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
68 GACCCTGGTTTGTACAAACTGCCTCAAACACAGAGTTTAGGGGCTTTTCCCTTCTCTCCGCCAACCTCTGACAGGCAGAG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
69 TCTGAGGCCTGGCCTCCAGCTGCTGCGGGGAGCAGGTCTGGTAAAGAATCCTGTGCAGGTCAGTGGTATACAGGTCCTGT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
70 CAGGTGACAGCCTGGGCGAGAGACTGGAAAGTATCAGGATAACACGGCTGCCAGACGAACAACAAAACAACACTGAATTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
71 ACAAGGCGCATTCGAATCCTCTCTCAGTCCATTTGATCCTCAGTCACACAGCCGAGTAGACACTTTATCAACTCATTTAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
72 CAGAAAGGGAAAGTGAAGCCCAGAGCGAGGCCAGCAACGTGGCAGGTCACTCTGGTCATCTAGGGCCTGTTCCCAACTCT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
73 TTCACATGTGGGTCTCCAATATGTTCCCTCCTGTCCCAATCTCTGCCGGCCCTCAGGTACATCCCAGAGGGCATGCAGTG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
74 CTCATGTGGAATCGACTACTACACCCTCAAGCCGGAGGTCAACAACGAGTCCTTTGTCATCTACATGTTCGTGGTCCACT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
75 TCACCATCCCTATGATTGTCATATTCTTTTGCTATGGACAGCTGGTCTTCACCGTCAAGGAGGTAAGGTCATGTGTTGGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
76 CACTGGGGACATGCACACTGAGTGAATGGAGCCCAGCTCCATTCCCAGAGTTGCCACAGTCTGGACACCTGACCTTGTGT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
77 CCCTGCAGGCAGCTGCCCAGCAGCAGGAGTCAGCCACCACCCAGAAGGCCGAGAAGGAGGTCACCCGTATGGTCATCATC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
78 ATGGTCATTGCTTTCCTAATCTGTTGGCTGCCGTATGCCGGCGTGGCATTCTACATCTTCACCCACCAGGGCTCTAACTT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
79 TGGCCCCATCTTCATGACCCTCCCGGCATTCTTTGCCAAGTCGTCCTCCATCTACAACCCTGTCATCTATATCATGATGA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
80 ACAAGCAGGTGCCAGGTGGTAGGGAGGGAGGGTCTGGGTCCCCCAGGCTGCAGGCACTGCCCACAGAGGACAAGCCACAT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
81 CCTTGACTAGGCAGACCCCAGTCTTCCCATCTGCAAAATTAGGCAGGGGAGTTCGTCTCCCCCAGGCATCAGAGACATCG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
82 GGGAGAAATGCACATTTCTGGAGATGAATCAGCATCTCAGGGTGGGCCCAGGAACCTGCACTTCTAAAAACCATTCCACA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
83 TGACTCTGAGGCTAGCATGAGAAGTGATGATCCACATGGTTCTGGAGGCCTGCTTTAAAAGTCAAGTGGTCAAAGTCCCA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
84 AGCCTGGGAACGGGATGGTGCCAGTCTCCATTAAAGAGATCAAAAGGAGCTAGAAAGTCTTGTGATGAAAGATGAAGGGA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
85 TAAAGCCGTCCTTTAACACAGATCAGTGATTTCTCTGCAGAATCCATGACCCAGTGGGAAAAAGTGGTCCCTGGAGTCAG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
86 GCATATTGGATTCAAATCCTAGCTCTGCTATTTTCTAGCTATGTAACCTTGGGCAAGTCATCTCCCTTCTCTGTGCTTCA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
87 GTTTCTTCTTTCATAGAAAGGGTAAAATCCCAAACTCTTGGGTTAAATGAGATAACTTACATAGCCCTTGATATGCAGAG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
88 GCATTATGGAATGTCGTTAGTGACAAAGTTCCCTTGGGTTTGGTCCCTGGTATCTCTGGAGTGAGATTGCATATGTTCCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
89 TTCAGAGGGTCAGATTTGGGATGAGAGTGGAGGCTGCGAGGGCCTGAGTGGGAAGGGATTGGAGGCAAATCTCACCAACC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
90 ATGTCAGTTTGCTACACACACTTTGGGTGGACCCTGACCCTGACTCATGCTTCTTGCCTTCCAGTTCCGGAACTGCATGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
91 TCACTACCCTCTGCTGTGGCAAGAACCCACTGGGTGACGATGAGGCCTCCACCACTGCCTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
92 >GQ290312.1 Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
93 GTGCCCTTCTCCAACAAGACGGGTGTGGTGCGCAGCCCCTTCGAGTACCCGCAGTACTACCTGGCTGAGCCCTGGCAGTT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
94 CTCCATGCTGGCTGCCTACATGTTTCTGCTGATCGTGCTCGGATTCCCCATCAACTTCCTCACGCTCTACGTCACCGTCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
95 AGCACAAGAAGCTGCGCACGCCTCTCAACTACATCCTGCTCAACCTGGCTGTGGCCAACCTCTTCATGGTCTTTGGAGGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
96 TTCACCACCACCCTGTATACCTCTATGCATGGATACTTCGTCTTCGGGGCCACGGGATGCAATCTGGAGGGCTTCTTTGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
97 CACGCTGGGCGGTGAAATCGCCCTGTGGTCCCTGGTGGTCCTGGCCATCGAGCGGTATGTGGTGGTCTGCAAGCCCATGA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
98 GCAACTTCCGCTTTGGGGAGAACCACGCCATCATGGGCCTCGCCTTCACGTGGGTCATGGCACTGGCCTGCGCTGCACCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
99 CCACTAGCCGGCTGGTCCAGGTACATCCCAGAGGGCATGCAGTGCTCGTGTGGGATTGACTACTACACGCTCAAACCGGA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
100 GGTCAACAACGAGTCCTTCGTCATCTACATGTTCGTGGTCCACTTCACCATCCCCATGATTGTCATTTTCTTCTGCTACG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
101 GACAGCTGGTGTTCACAGTGAAGGAGGCGGCTGCCCAGCAGCAGGAGTCAGCCACCACCCAGAAGGCCGAGAAGGAAGTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
102 ACGCGCATGGTCATCATCATGGTCGTTGCGTTCCTAATCTGTTGGCTGCCCTACGCCAGCGTGGCATTCTACATCTTTAC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
103 CCACCAGGGCTCTAACTTTGGCCCTGTCTTCATGACCATCCCGGCATTCTTCGCCAAGTCATCCTCCATCTACAACCCGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
104 TCATCTATATCATGATGAACAAGCAGTTCCGGAACTGCATGCTCACCACCCTCTGCTGTGGCAAGAACCCACTGGGTGAT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
105 GACGAAGCATCCACCACTGCCTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
106 >AB062417.1 Synthetic construct Bos taurus gene for rhodopsin, complete cds
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
107 ATGAACGGGACCGAGGGCCCAAACTTCTACGTGCCTTTCTCCAACAAGACGGGCGTCGTACGCAGCCCCTTCGAGGCGCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
108 GCAGTACTACCTGGCTGAGCCATGGCAGTTCAGCATGCTGGCCGCCTACATGTTCCTGCTGATCATGCTTGGCTTCCCCA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
109 TCAACTTCCTCACGCTGTACGTCACAGTCCAGCACAAGAAGCTGAGGACCCCCCTCAACTACATCCTGCTCAACCTGGCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
110 GTGGCAGATCTCTTCATGGTGTTCGGGGGCTTCACCACCACCCTGTATACCTCTCTGCACGGGTACTTCGTGTTCGGTCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
111 GACGGGCTGCAACCTCGAGGGCTTCTTTGCCACCTTAGGCGGTGAAATTGCACTGTGGTCCTTGGTGGTGCTAGCCATCG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
112 AGCGGTACGTAGTGGTGTGCAAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCACGCCATCATGGGCGTCGCATTCACC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
113 TGGGTCATGGCTCTGGCCTGTGCGGCCCCCCCCCTCGTCGGCTGGTCTAGATACATCCCGGAGGGGATGCAGTGCTCGTG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
114 CGGGATCGATTACTACACGCCCCACGAGGAGACCAACAATGAGTCGTTCGTCATCTACATGTTCGTTGTACACTTCATCA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
115 TCCCCCTGATTGTCATATTCTTCTGCTACGGGCAGCTGGTCTTCACCGTCAAGGAGGCTGCAGCCCAGCAGCAGGAGTCG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
116 GCCACCACTCAGAAGGCCGAGAAGGAGGTCACGCGTATGGTCATCATCATGGTCATCGCTTTCCTCATATGCTGGCTGCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
117 CTACGCAGGTGTGGCGTTCTACATCTTCACCCATCAGGGATCCGACTTTGGCCCCATCTTCATGACCATCCCGGCTTTCT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
118 TTGCCAAGACGTCTGCCGTCTATAACCCCGTCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGGTCACCACT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
119 CTCTGCTGTGGCAAGAACCCCCTAGGTGACGACGAGGCCTCCACGACCGTGTCCAAGACAGAGACCAGCCAAGTGGCCCC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
120 TGCCTAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
121 >AB043817.1 Conger myriaster conf gene for fresh water form rod opsin, complete cds
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
122 CCGCTACTGACGAACCGCAACCATGAACGGCACTGAGGGACCTAACTTCTACATCCCCATGTCAAACGCCACTGGTGTAG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
123 TGAGGAGTCCATTTGAATACCCGCAGTACTACCTTGCAGAACCATGGGCTTTCTCAGCTCTGTCTGCCTACATGTTCTTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
124 CTGATTATCGCCGGATTCCCCATCAACTTCCTCACCCTGTATGTCACCATCGAACATAAGAAACTGAGGACCCCACTGAA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
125 CTACATTCTGCTGAACCTGGCCGTGGCCGACCTCTTCATGGTGTTTGGCGGATTCACCACCACGATGTACACCTCCATGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
126 ACGGCTACTTTGTCTTCGGCCCCACCGGCTGCAACATCGAAGGGTTCTTCGCCACCCTCGGCGGCGAGATTGCCCTCTGG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
127 TGCCTCGTTGTCCTGGCCATTGAAAGGTGGATGGTCGTCTGCAAGCCAGTGACCAATTTCCGCTTCGGTGAGAGCCATGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
128 CATCATGGGTGTCATGGTGACCTGGACCATGGCATTGGCCTGTGCCCTCCCCCCTCTCTTCGGCTGGTCTCGGTACATTC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
129 CGGAAGGTCTGCAGTGCTCGTGCGGGATCGACTACTATACCCGGGCGCCTGGGATCAACAATGAGTCCTTTGTGATCTAC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
130 ATGTTTACCTGCCACTTCTCCATCCCACTCGCCGTCATCTCTTTCTGCTACGGCCGACTGGTGTGCACCGTCAAAGAGGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
131 CGCTGCCCAGCAACAGGAGTCCGAGACCACCCAGAGGGCTGAGCGGGAGGTCACCCGCATGGTCGTCATCATGGTCATCT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
132 CCTTCCTGGTCTGCTGGGTGCCCTATGCCAGTGTGGCCTGGTACATCTTTACCCACCAGGGAAGCACTTTTGGGCCCATC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
133 TTCATGACCATTCCATCCTTCTTTGCCAAGAGTTCAGCCCTCTACAACCCCATGATCTACATCTGCATGAACAAGCAGTT
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
134 CCGCCATTGCATGATCACCACCCTCTGCTGTGGGAAGAACCCCTTCGAGGAGGAGGATGGAGCGTCCGCCACTAGCTCTA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
135 AAACTGAGGCTTCATCCGTGTCCTCCAGCTCTGTCTCCCCGGCATAAACCTTGTTTGACCGAACACCACGCATCAACACA
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
136 AAGACCAAGAATGCTGACTAAATGCTAACATTTCAGGGAAATCCAAAGACTTTTTACTATTTTTTTACACAACCATATAG
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
137 GTTGCAAACAGAGGTTTAGCCCTGTTTACAGGTTGTCATCAATGTGATGTCAGTATGTACAATATAGTCAACTTGATAGC
4dcc9429d6d2 v0.2.00, updated to depend on BLAST+ 2.5.0
peterjc
parents:
diff changeset
138 AAGTTGTTGGCTTATTTCAGATTGTATGGGCAATGTAATCAACCATATGTGAAATAAATTGCAA