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comparison test-data/lastz_d_test2.out @ 2:8e9252994649 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lastz commit c5379af63b23648020a4709f8ed9d9eac26582aa
author iuc
date Fri, 02 Mar 2018 12:06:35 -0500
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1:3c13c9c09ad9 2:8e9252994649
1 # (a LASTZ scoring set, created by "LASTZ --infer")
2
3 bad_score = X:-1781 # used for sub[X][*] and sub[*][X]
4 fill_score = -178 # used when sub[*][*] not otherwise defined
5 gap_open_penalty = 400
6 gap_extend_penalty = 30
7
8 A C G T
9 A 72 -79 -49 -97
10 C -79 100 -178 -49
11 G -49 -178 100 -79
12 T -97 -49 -79 72