Mercurial > repos > devteam > lastz

annotate test-data/phiX_split.fasta @ 2:8e9252994649 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lastz commit c5379af63b23648020a4709f8ed9d9eac26582aa
author iuc
date Fri, 02 Mar 2018 12:06:35 -0500
parents 3c13c9c09ad9
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
1 >phiX1
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
2 GAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
3 GATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
4 ATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACTAACGATTCTG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
5 TCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
6 GATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
7 TGAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
8 TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
9 CGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
10 TGCGTTTATGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
11 TCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTAC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
12 GGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
13 CGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCGGAAGGAG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
14 TGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
15 AAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
16 CCCTTACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
17 TCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGAC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
18 TCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
19 CTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
20 GGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGTTATATTGACCATGCCGCTTTTCTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
21 GGCACGATTAACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
22 ACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
23 TCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
24 TCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
25 ATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAAC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
26 CTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
27 GATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
28 CGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGAC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
29 TAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
30 TATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
31 TTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTCTCCTGCTTATCACCTTCTTGA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
32 AGGCTTCCCATTCATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGAT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
33 TATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
34 ATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAAC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
35 >phiX2
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
36 GCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
37 TTAGGAGTTTAATCATGTTTCAGACTTTTATTTCTCGCCATAATTCAAACTTTTTTTCTGATAAGCTGGT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
38 TCTCACTTCTGTTACTCCAGCTTCTTCGGCACCTGTTTTACAGACACCTAAAGCTACATCGTCAACGTTA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
39 TATTTTGATAGTTTGACGGTTAATGCTGGTAATGGTGGTTTTCTTCATTGCATTCAGATGGATACATCTG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
40 TCAACGCCGCTAATCAGGTTGTTTCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
41 CTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTACCCTCCCGACTGCCTATGATGTTTATCCTTTG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
42 AATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGTGACTATTGACGTCCTTCCCCGTACGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
43 CGGGCAATAACGTTTATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTACTAAATGCCGCGGATTGGT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
44 TTCGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATTTATGTTTGGTG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
45 CTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
46 AGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTGATGCT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
47 GGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCCCTAGTTTTGTTTCTG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
48 GTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
49 TAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTAT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
50 CTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
51 TTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
52 GATGCAAAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGAC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
53 CAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
54 TGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
55 AACGGCTGGTCAGTATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGAC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
56 TTAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCTCTTCTCATATTGGCGCTACTGCAAAGGATATTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
57 CTAATGTCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTTTTCATGGTATTGATAAAGCTGTTGCCGA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
58 TACTTGGAACAATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCTCTAATTTGTCTAGGAAATAACCG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
59 TCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAATCTTGGAGGCTTTTTTATGGTTCGTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
60 CTTATTACCCTTCTGAATGTCACGCTGATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAACCTGCTAT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
61 TGAGGCTTGTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGATAACCGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
62 ATCAAGCTCTTGGAAGAGATTCTGTCTTTTCGTATGCAGGGCGTTGAGTTCGATAATGGTGATATGTATG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
63 TTGACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAGTTTGTATCTGTTACTGAGAAGTTAATGGATGA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
64 ATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTATAGACCACCGCCCCGAAGGG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
65 GACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTTACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
66 CTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
67 GCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
68 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
69 ATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
70 CAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
71 CGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
72 GTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCAT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
73 CGCAGTTCGCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
74 CCGCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATA
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
75 TGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTACT
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
76 TCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTG
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
77 TCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
78 AGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACC
3c13c9c09ad9 planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
devteam
parents:
diff changeset
79 TGTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCA