Mercurial > repos > devteam > fastx_barcode_splitter
comparison macros.xml @ 6:8da8564e2e45 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/fastx_toolkit/fastx_barcode_splitter commit fd099d17eceaa319fbfe429f4725328d88b18c9f
author | iuc |
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date | Thu, 10 Aug 2023 06:51:23 +0000 |
parents | da00153634dc |
children |
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5:da00153634dc | 6:8da8564e2e45 |
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19 ]]> | 19 ]]> |
20 </token> | 20 </token> |
21 <token name="@GZIP@"> | 21 <token name="@GZIP@"> |
22 <![CDATA[ | 22 <![CDATA[ |
23 #if $input.is_of_type('fasta.gz', 'fastqsanger.gz', 'fastqsolexa.gz', 'fastqillumina.gz'): | 23 #if $input.is_of_type('fasta.gz', 'fastqsanger.gz', 'fastqsolexa.gz', 'fastqillumina.gz'): |
24 -z | 24 | gzip -c |
25 #elif $input.is_of_type('fastqsanger.bz2', 'fastqsolexa.bz2', 'fastqillumina.bz2'): | |
26 | bzip2 -c | |
25 #end if | 27 #end if |
26 ]]> | 28 ]]> |
27 </token> | 29 </token> |
28 <xml name="requirements"> | 30 <xml name="requirements"> |
29 <requirements> | 31 <requirements> |
30 <requirement type="package" version="@VERSION@">fastx_toolkit</requirement> | 32 <requirement type="package" version="@VERSION@">fastx_toolkit</requirement> |
31 <yield /> | 33 <yield /> |
32 </requirements> | 34 </requirements> |
33 </xml> | 35 </xml> |
34 <token name="@VERSION@">0.0.14</token> | 36 <token name="@VERSION@">0.0.14</token> |
37 <token name="@VERSION_SUFFIX@">2</token> | |
35 <token name="@SANGER@">fastqsanger,fastqsanger.gz,fastqsanger.bz2</token> | 38 <token name="@SANGER@">fastqsanger,fastqsanger.gz,fastqsanger.bz2</token> |
36 <token name="@SOLEXA@">fastqsolexa,fastqsolexa.gz,fastqsolexa.bz2</token> | 39 <token name="@SOLEXA@">fastqsolexa,fastqsolexa.gz,fastqsolexa.bz2</token> |
37 <token name="@ILLUMINA@">fastqillumina,fastqillumina.gz,fastqillumina.bz2</token> | 40 <token name="@ILLUMINA@">fastqillumina,fastqillumina.gz,fastqillumina.bz2</token> |
38 <token name="@FASTQS@">@SANGER@,@SOLEXA@,@ILLUMINA@</token> | 41 <token name="@FASTQS@">@SANGER@,@SOLEXA@,@ILLUMINA@</token> |
39 <token name="@FASTAS@">fasta,fasta.gz</token> | 42 <token name="@FASTAS@">fasta,fasta.gz</token> |