Mercurial > repos > devteam > fastx_artifacts_filter
comparison fastx_artifacts_filter.xml @ 5:84d56dd32719 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/fastx_toolkit/fastx_artifacts_filter commit 4c002e52261da2e7609735883d91fa1610ce6ce7"
| author | iuc |
|---|---|
| date | Thu, 30 Jan 2020 18:26:39 +0000 |
| parents | d8c0849cd623 |
| children | 902e2ff81393 |
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| 4:d8c0849cd623 | 5:84d56dd32719 |
|---|---|
| 1 <tool id="cshl_fastx_artifacts_filter" version="1.0.1" name="Remove sequencing artifacts"> | 1 <tool id="cshl_fastx_artifacts_filter" version="1.0.1+galaxy0" name="Remove sequencing artifacts"> |
| 2 <description></description> | 2 <description></description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="requirements" /> | 6 <expand macro="requirements"> |
| 7 <requirement type="package" version="1.0.8">bzip2</requirement> | |
| 8 </expand> | |
| 7 <command detect_errors="exit_code"><![CDATA[ | 9 <command detect_errors="exit_code"><![CDATA[ |
| 8 @CATS@ fastx_artifacts_filter | 10 @CATS@ fastx_artifacts_filter |
| 9 -v | 11 -v |
| 10 -o '$output' | |
| 11 @FQQUAL@ | 12 @FQQUAL@ |
| 12 @GZIP@ | 13 @GZIP@ > '$output' |
| 13 ]]></command> | 14 ]]></command> |
| 14 | 15 |
| 15 <inputs> | 16 <inputs> |
| 16 <expand macro="fastx_input" /> | 17 <expand macro="fastx_input" /> |
| 17 </inputs> | 18 </inputs> |