Mercurial > repos > devteam > fastq_filter

changeset 4:283a55c8bcb7 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/galaxy_sequence_utils/fastq_filter commit 31edb920789fbd080260f853bc856be72fa7cfa8"
author devteam
date Fri, 01 Nov 2019 13:16:29 -0400
parents ac4a365726a1
children 31685bacc9fe
files fastq_filter.xml
diffstat 1 files changed, 7 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/fastq_filter.xml	Sat Sep 30 14:55:35 2017 -0400
+++ b/fastq_filter.xml	Fri Nov 01 13:16:29 2019 -0400
@@ -3,6 +3,12 @@
     <requirements>
         <requirement type="package" version="1.1.1">galaxy_sequence_utils</requirement>
     </requirements>
+    <edam_topics>
+        <edam_topic>topic_0622</edam_topic>
+    </edam_topics>
+    <edam_operations>
+        <edam_operation>operation_3695</edam_operation>
+    </edam_operations>
     <command><![CDATA[
 gx-fastq-filter '$input_file' '$fastq_filter_file' '$output_file' '$output_file.files_path' '${input_file.extension[len( 'fastq' ):]}'
     ]]></command>
@@ -241,7 +247,7 @@
             <param name="score_operation" value="min"/>
             <param name="score_comparison" value="&gt;="/>
             <param name="score" value="1"/>
-            <output name="output_file" file="sanger_full_range_original_sanger.fastqsanger"  ftype="fastqsanger" />
+            <output name="output_file" file="sanger_full_range_original_sanger.fastqsanger" ftype="fastqsanger" />
         </test>
         <test>
             <param name="input_file" value="sanger_full_range_original_sanger.fastqsanger" ftype="fastqsanger"/>