# HG changeset patch
# User iuc
# Date 1548692453 18000
# Node ID dbd24c72f1669db0b2fb7880051bc02e54ab98a7
# Parent  27c43fb015f0d38552886564eedd86d9ef842b7f
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit fed02ef07e0a45f0d5a89cdca364607ab8da6cf9

diff -r 27c43fb015f0 -r dbd24c72f166 emboss_seqret.xml
--- a/emboss_seqret.xml	Fri Jun 22 03:24:29 2018 -0400
+++ b/emboss_seqret.xml	Mon Jan 28 11:20:53 2019 -0500
@@ -4,6 +4,7 @@
     <import>macros.xml</import>
   </macros>
   <expand macro="requirements" />
+  <expand macro="stdio" />
   <code file="emboss_format_corrector.py" />
   <command>seqret -sequence '$input1' -outseq '$out_file1' -feature $feature -firstonly $firstonly -osformat2 $out_format1 -auto</command>
   <inputs>
diff -r 27c43fb015f0 -r dbd24c72f166 macros.xml
--- a/macros.xml	Fri Jun 22 03:24:29 2018 -0400
+++ b/macros.xml	Mon Jan 28 11:20:53 2019 -0500
@@ -5,6 +5,12 @@
             <requirement type="package" version="@VERSION@">emboss</requirement>
         </requirements>
     </xml>
+    <xml name="stdio">
+        <stdio>
+            <regex level="fatal_oom" match="insufficient memory available" source="both" />
+            <exit_code range="1:" />
+        </stdio>
+    </xml>
     <xml name="citations">
         <citations>
             <citation type="doi">10.1016/S0168-9525(00)02024-2</citation>