Mercurial > repos > devteam > emboss_5
view emboss_wordcount.xml @ 17:bde3097ac0f6 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit d5dfff2cd58b094e0e4a6f8dc475de5facd9700b"
author | iuc |
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date | Tue, 03 Dec 2019 02:12:56 +0000 |
parents | 27c43fb015f0 |
children | 21a9fb508031 |
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<tool id="EMBOSS: wordcount109" name="wordcount" version="@VERSION@.1"> <description>Counts words of a specified size in a DNA sequence</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <command>wordcount -sequence '$input1' -outfile '$out_file1' -wordsize $wordsize -auto</command> <inputs> <param name="input1" type="data" format="fasta" label="Sequence" /> <param name="wordsize" type="integer" value="4" label="Word size" /> </inputs> <outputs> <data name="out_file1" format="wordcount" /> </outputs> <tests> <test> <param name="input1" value="2.fasta"/> <param name="wordsize" value="4"/> <output name="out_file1" file="emboss_wordcount_out.wordcount"/> </test> </tests> <help> .. class:: warningmark The input dataset needs to be sequences. ----- You can view the original documentation here_. .. _here: http://galaxy-iuc.github.io/emboss-5.0-docs/wordcount.html </help> <expand macro="citations" /> </tool>