Mercurial > repos > devteam > emboss_5
view test-data/emboss_epestfind_out.epestfind @ 6:5edd293af092
Uploaded complex tool dependency on EMBOSS 5.0.0.
| author | devteam |
|---|---|
| date | Thu, 20 Jun 2013 15:21:54 -0400 |
| parents | a74a91f0ca4a |
| children |
line wrap: on
line source
PEST-find: Finds PEST motifs as potential proteolytic cleavage sites. No PEST motif was identified in Sequence from 1 to 561. ---------+---------+---------+---------+---------+---------+ 1 GTTCGATGCCTAAAATACCTTCTTTTGTCCCTACACAGACCACAGTTTTCCTAATGGCTT 60 61 TACACCGACTAGAAATTCTTGTGCAAGCACTAATTGAAAGCGGTTGGCCTAGAGTGTTAC 120 121 CGGTTTGTATAGCTGAGCGCGTCTCTTGCCCTGATCAAAGGTTCATTTTCTCTACTTTGG 180 181 AAGACGTTGTGGAAGAATACAACAAGTACGAGTCTCTCCCCCCTGGTTTGCTGATTACTG 240 241 GATACAGTTGTAATACCCTTCGCAACACCGCGTAACTATCTATATGAATTATTTTCCCTT 300 301 TATTATATGTAGTAGGTTCGTCTTTAATCTTCCTTTAGCAAGTCTTTTACTGTTTTCGAC 360 361 CTCAATGTTCATGTTCTTAGGTTGTTTTGGATAATATGCGGTCAGTTTAATCTTCGTTGT 420 421 TTCTTCTTAAAATATTTATTCATGGTTTAATTTTTGGTTTGTACTTGTTCAGGGGCCAGT 480 481 TCATTATTTACTCTGTTTGTATACAGCAGTTCTTTTATTTTTAGTATGATTTTAATTTAA 540 541 AACAATTCTAATGGTCAAAAA 561 Symbols PEST motifs +++++++ potential OOOOOOO poor