Mercurial > repos > devteam > emboss_5

diff test-data/emboss_fuzztran_out.tabular @ 1:a74a91f0ca4a

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Uploaded emboss_testdata.tar
author devteam
date Tue, 05 Jun 2012 14:00:15 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/emboss_fuzztran_out.tabular	Tue Jun 05 14:00:15 2012 -0400
@@ -0,0 +1,133 @@
+SeqName	Start	End	Score	Strand	Pattern_name	Mismatch	Frame	PStart	PEnd	Translation
+hg17	3958	3963	2	+	pattern1	.	1	1320	1321	AA
+hg17	3961	3966	2	+	pattern1	.	1	1321	1322	AA
+hg17	4099	4104	2	+	pattern1	.	1	1367	1368	AA
+hg17	4315	4320	2	+	pattern1	.	1	1439	1440	AA
+hg17	5194	5199	2	+	pattern1	.	1	1732	1733	AA
+hg17	8584	8589	2	+	pattern1	.	1	2862	2863	AA
+hg17	9232	9237	2	+	pattern1	.	1	3078	3079	AA
+hg17	9343	9348	2	+	pattern1	.	1	3115	3116	AA
+hg17	9715	9720	2	+	pattern1	.	1	3239	3240	AA
+hg17	9769	9774	2	+	pattern1	.	1	3257	3258	AA
+hg17	9841	9846	2	+	pattern1	.	1	3281	3282	AA
+hg17	9994	9999	2	+	pattern1	.	1	3332	3333	AA
+hg17	10045	10050	2	+	pattern1	.	1	3349	3350	AA
+hg17	10048	10053	2	+	pattern1	.	1	3350	3351	AA
+hg17	12157	12162	2	+	pattern1	.	1	4053	4054	AA
+hg17	12487	12492	2	+	pattern1	.	1	4163	4164	AA
+hg17	12688	12693	2	+	pattern1	.	1	4230	4231	AA
+hg17	12691	12696	2	+	pattern1	.	1	4231	4232	AA
+hg17	15010	15015	2	+	pattern1	.	1	5004	5005	AA
+hg17	17521	17526	2	+	pattern1	.	1	5841	5842	AA
+hg17	17551	17556	2	+	pattern1	.	1	5851	5852	AA
+hg17	1148	1153	2	+	pattern1	.	2	383	384	AA
+hg17	2078	2083	2	+	pattern1	.	2	693	694	AA
+hg17	2432	2437	2	+	pattern1	.	2	811	812	AA
+hg17	3080	3085	2	+	pattern1	.	2	1027	1028	AA
+hg17	3593	3598	2	+	pattern1	.	2	1198	1199	AA
+hg17	3692	3697	2	+	pattern1	.	2	1231	1232	AA
+hg17	4055	4060	2	+	pattern1	.	2	1352	1353	AA
+hg17	5018	5023	2	+	pattern1	.	2	1673	1674	AA
+hg17	5147	5152	2	+	pattern1	.	2	1716	1717	AA
+hg17	8276	8281	2	+	pattern1	.	2	2759	2760	AA
+hg17	9587	9592	2	+	pattern1	.	2	3196	3197	AA
+hg17	9668	9673	2	+	pattern1	.	2	3223	3224	AA
+hg17	9920	9925	2	+	pattern1	.	2	3307	3308	AA
+hg17	9971	9976	2	+	pattern1	.	2	3324	3325	AA
+hg17	10112	10117	2	+	pattern1	.	2	3371	3372	AA
+hg17	10115	10120	2	+	pattern1	.	2	3372	3373	AA
+hg17	11837	11842	2	+	pattern1	.	2	3946	3947	AA
+hg17	12026	12031	2	+	pattern1	.	2	4009	4010	AA
+hg17	12944	12949	2	+	pattern1	.	2	4315	4316	AA
+hg17	12953	12958	2	+	pattern1	.	2	4318	4319	AA
+hg17	13229	13234	2	+	pattern1	.	2	4410	4411	AA
+hg17	13232	13237	2	+	pattern1	.	2	4411	4412	AA
+hg17	15356	15361	2	+	pattern1	.	2	5119	5120	AA
+hg17	15482	15487	2	+	pattern1	.	2	5161	5162	AA
+hg17	16061	16066	2	+	pattern1	.	2	5354	5355	AA
+hg17	17822	17827	2	+	pattern1	.	2	5941	5942	AA
+hg17	15	20	2	+	pattern1	.	3	5	6	AA
+hg17	33	38	2	+	pattern1	.	3	11	12	AA
+hg17	3669	3674	2	+	pattern1	.	3	1223	1224	AA
+hg17	3759	3764	2	+	pattern1	.	3	1253	1254	AA
+hg17	5646	5651	2	+	pattern1	.	3	1882	1883	AA
+hg17	5847	5852	2	+	pattern1	.	3	1949	1950	AA
+hg17	5850	5855	2	+	pattern1	.	3	1950	1951	AA
+hg17	5853	5858	2	+	pattern1	.	3	1951	1952	AA
+hg17	7674	7679	2	+	pattern1	.	3	2558	2559	AA
+hg17	9699	9704	2	+	pattern1	.	3	3233	3234	AA
+hg17	9891	9896	2	+	pattern1	.	3	3297	3298	AA
+hg17	10074	10079	2	+	pattern1	.	3	3358	3359	AA
+hg17	10407	10412	2	+	pattern1	.	3	3469	3470	AA
+hg17	12675	12680	2	+	pattern1	.	3	4225	4226	AA
+hg17	13746	13751	2	+	pattern1	.	3	4582	4583	AA
+hg17	17115	17120	2	+	pattern1	.	3	5705	5706	AA
+hg17	17421	17426	2	+	pattern1	.	3	5807	5808	AA
+hg17	19122	19127	2	+	pattern1	.	3	6374	6375	AA
+hg17	19353	19358	2	+	pattern1	.	3	6451	6452	AA
+hg17	-2312	-2317	2	-	pattern1	.	1	772	773	AA
+hg17	-4073	-4078	2	-	pattern1	.	1	1359	1360	AA
+hg17	-4652	-4657	2	-	pattern1	.	1	1552	1553	AA
+hg17	-4778	-4783	2	-	pattern1	.	1	1594	1595	AA
+hg17	-6902	-6907	2	-	pattern1	.	1	2302	2303	AA
+hg17	-6905	-6910	2	-	pattern1	.	1	2303	2304	AA
+hg17	-7181	-7186	2	-	pattern1	.	1	2395	2396	AA
+hg17	-7190	-7195	2	-	pattern1	.	1	2398	2399	AA
+hg17	-8108	-8113	2	-	pattern1	.	1	2704	2705	AA
+hg17	-8297	-8302	2	-	pattern1	.	1	2767	2768	AA
+hg17	-10019	-10024	2	-	pattern1	.	1	3341	3342	AA
+hg17	-10022	-10027	2	-	pattern1	.	1	3342	3343	AA
+hg17	-10163	-10168	2	-	pattern1	.	1	3389	3390	AA
+hg17	-10214	-10219	2	-	pattern1	.	1	3406	3407	AA
+hg17	-10466	-10471	2	-	pattern1	.	1	3490	3491	AA
+hg17	-10547	-10552	2	-	pattern1	.	1	3517	3518	AA
+hg17	-11858	-11863	2	-	pattern1	.	1	3954	3955	AA
+hg17	-14987	-14992	2	-	pattern1	.	1	4997	4998	AA
+hg17	-15116	-15121	2	-	pattern1	.	1	5040	5041	AA
+hg17	-16079	-16084	2	-	pattern1	.	1	5361	5362	AA
+hg17	-16442	-16447	2	-	pattern1	.	1	5482	5483	AA
+hg17	-16541	-16546	2	-	pattern1	.	1	5515	5516	AA
+hg17	-17054	-17059	2	-	pattern1	.	1	5686	5687	AA
+hg17	-17702	-17707	2	-	pattern1	.	1	5902	5903	AA
+hg17	-18056	-18061	2	-	pattern1	.	1	6020	6021	AA
+hg17	-18986	-18991	2	-	pattern1	.	1	6330	6331	AA
+hg17	-783	-788	2	-	pattern1	.	2	262	263	AA
+hg17	-1014	-1019	2	-	pattern1	.	2	339	340	AA
+hg17	-2715	-2720	2	-	pattern1	.	2	906	907	AA
+hg17	-3021	-3026	2	-	pattern1	.	2	1008	1009	AA
+hg17	-6390	-6395	2	-	pattern1	.	2	2131	2132	AA
+hg17	-7461	-7466	2	-	pattern1	.	2	2488	2489	AA
+hg17	-9729	-9734	2	-	pattern1	.	2	3244	3245	AA
+hg17	-10062	-10067	2	-	pattern1	.	2	3355	3356	AA
+hg17	-10245	-10250	2	-	pattern1	.	2	3416	3417	AA
+hg17	-10437	-10442	2	-	pattern1	.	2	3480	3481	AA
+hg17	-12462	-12467	2	-	pattern1	.	2	4155	4156	AA
+hg17	-14283	-14288	2	-	pattern1	.	2	4762	4763	AA
+hg17	-14286	-14291	2	-	pattern1	.	2	4763	4764	AA
+hg17	-14289	-14294	2	-	pattern1	.	2	4764	4765	AA
+hg17	-14490	-14495	2	-	pattern1	.	2	4831	4832	AA
+hg17	-16377	-16382	2	-	pattern1	.	2	5460	5461	AA
+hg17	-16467	-16472	2	-	pattern1	.	2	5490	5491	AA
+hg17	-20103	-20108	2	-	pattern1	.	2	6702	6703	AA
+hg17	-20121	-20126	2	-	pattern1	.	2	6708	6709	AA
+hg17	17553	17548	2	-	pattern1	.	3	863	864	AA
+hg17	17523	17518	2	-	pattern1	.	3	873	874	AA
+hg17	15012	15007	2	-	pattern1	.	3	1710	1711	AA
+hg17	12693	12688	2	-	pattern1	.	3	2483	2484	AA
+hg17	12690	12685	2	-	pattern1	.	3	2484	2485	AA
+hg17	12489	12484	2	-	pattern1	.	3	2551	2552	AA
+hg17	12159	12154	2	-	pattern1	.	3	2661	2662	AA
+hg17	10050	10045	2	-	pattern1	.	3	3364	3365	AA
+hg17	10047	10042	2	-	pattern1	.	3	3365	3366	AA
+hg17	9996	9991	2	-	pattern1	.	3	3382	3383	AA
+hg17	9843	9838	2	-	pattern1	.	3	3433	3434	AA
+hg17	9771	9766	2	-	pattern1	.	3	3457	3458	AA
+hg17	9717	9712	2	-	pattern1	.	3	3475	3476	AA
+hg17	9345	9340	2	-	pattern1	.	3	3599	3600	AA
+hg17	9234	9229	2	-	pattern1	.	3	3636	3637	AA
+hg17	8586	8581	2	-	pattern1	.	3	3852	3853	AA
+hg17	5196	5191	2	-	pattern1	.	3	4982	4983	AA
+hg17	4317	4312	2	-	pattern1	.	3	5275	5276	AA
+hg17	4101	4096	2	-	pattern1	.	3	5347	5348	AA
+hg17	3963	3958	2	-	pattern1	.	3	5393	5394	AA
+hg17	3960	3955	2	-	pattern1	.	3	5394	5395	AA