Mercurial > repos > devteam > emboss_5

annotate test-data/emboss_compseq_out.compseq @ 17:bde3097ac0f6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/emboss_5 commit d5dfff2cd58b094e0e4a6f8dc475de5facd9700b"
author iuc
date Tue, 03 Dec 2019 02:12:56 +0000
parents a74a91f0ca4a
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
1 #
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
2 # Output from 'compseq'
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
3 #
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
4 # The Expected frequencies are calculated on the (false) assumption that every
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
5 # word has equal frequency.
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
6 #
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
7 # The input sequences are:
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
8 # Sequence
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
9
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
10
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
11 Word size 2
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
12 Total count 560
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
13
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
14 #
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
15 # Word Obs Count Obs Frequency Exp Frequency Obs/Exp Frequency
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
16 #
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
17 AA 40 0.0714286 0.0625000 1.1428571
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
18 AC 27 0.0482143 0.0625000 0.7714286
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
19 AG 26 0.0464286 0.0625000 0.7428571
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
20 AT 41 0.0732143 0.0625000 1.1714286
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
21 CA 26 0.0464286 0.0625000 0.7428571
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
22 CC 24 0.0428571 0.0625000 0.6857143
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
23 CG 15 0.0267857 0.0625000 0.4285714
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
24 CT 41 0.0732143 0.0625000 1.1714286
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
25 GA 19 0.0339286 0.0625000 0.5428571
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
26 GC 17 0.0303571 0.0625000 0.4857143
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
27 GG 19 0.0339286 0.0625000 0.5428571
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
28 GT 43 0.0767857 0.0625000 1.2285714
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
29 TA 50 0.0892857 0.0625000 1.4285714
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
30 TC 38 0.0678571 0.0625000 1.0857143
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
31 TG 37 0.0660714 0.0625000 1.0571429
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
32 TT 97 0.1732143 0.0625000 2.7714286
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
33
a74a91f0ca4a Uploaded emboss_testdata.tar
devteam
parents:
diff changeset
34 Other 0 0.0000000 0.0000000 10000000000.0000000