Mercurial > repos > devteam > data_manager_twobit_builder
view data_manager_conf.xml @ 8:4a7740ee2892 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_twobit_builder commit 096286097ed5cdf189a1b68c3fc34d10f4142e54
author | iuc |
---|---|
date | Sun, 16 Apr 2023 08:28:51 +0000 |
parents | 94bffa4fdedc |
children |
line wrap: on
line source
<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/twobit_builder.xml" id="twobit_builder"> <data_table name="lastz_seqs"> <output> <column name="value" /> <column name="name" /> <column name="path" output_ref="out_file" > <move type="file"> <source>${path}</source> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/seq/${path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation> </column> </output> </data_table> <data_table name="twobit"> <output> <column name="value" /> <column name="path" output_ref="out_file" ><!-- move happens above --> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation> </column> </output> </data_table> <data_table name="alignseq_seq"> <output> <column name="type" /><!-- always seq --> <column name="value" /><!-- also dbkey --> <column name="path" output_ref="out_file" ><!-- move happens above --> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation> </column> </output> </data_table> </data_manager> </data_managers>