# HG changeset patch
# User devteam
# Date 1430165586 14400
# Node ID cdef63d8a1411f8bd772ab002308882fa3f655e7
# Parent  9e4d72083f9f5129e0853e00d3709db665d35a47
Uploaded

diff -r 9e4d72083f9f -r cdef63d8a141 data_manager/kraken_database_builder.xml
--- a/data_manager/kraken_database_builder.xml	Thu Apr 23 09:57:51 2015 -0400
+++ b/data_manager/kraken_database_builder.xml	Mon Apr 27 16:13:06 2015 -0400
@@ -16,7 +16,9 @@
         mkdir kraken-database && cd kraken-database &&
         kraken-build --threads \${GALAXY_SLOTS:-1} --download-taxonomy --db "${database_name}" &&
         #for $library in $library_list:
-            kraken-build --threads \${GALAXY_SLOTS:-1} --download-library $library --db "${database_name}"  &&
+            #if str($library) != 'None':
+                kraken-build --threads \${GALAXY_SLOTS:-1} --download-library $library --db "${database_name}"  &&
+            #end if
         #end for
         #for $fasta in $input_fasta:
             kraken-build --threads \${GALAXY_SLOTS:-1} --db "${database_name}" --add-to-library "$fasta"  &&