Mercurial > repos > devteam > data_manager_bowtie2_index_builder

comparison data_manager/bowtie2_index_builder.xml @ 8:62f1a6310409 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 12dc2dbca65c1e2e1cb51c163daf0fa251d84d8e"
author iuc
date Sun, 22 Dec 2019 15:34:40 +0000
parents 224f1598642a
children 2699da480b0b
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7:224f1598642a 8:62f1a6310409
1 <tool id="bowtie2_index_builder_data_manager" name="Bowtie2 index" tool_type="manage_data" version="@WRAPPER_VERSION@" profile="18.09"> 1 <tool id="bowtie2_index_builder_data_manager" name="Bowtie2 index" tool_type="manage_data" version="@WRAPPER_VERSION@.1+galaxy1" profile="18.09">
2 <description>builder</description> 2 <description>builder</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="@WRAPPER_VERSION@">bowtie2</requirement> 4 <requirement type="package" version="@WRAPPER_VERSION@">bowtie2</requirement>
5 <requirement type="package" version="3.7">python</requirement>
6 </requirements> 5 </requirements>
7 <macros> 6 <macros>
8 <token name="@WRAPPER_VERSION@">2.3.5.1</token> 7 <token name="@WRAPPER_VERSION@">2.3.5</token>
9 </macros> 8 </macros>
10 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
11 python '$__tool_directory__/bowtie2_index_builder.py' 10 python '$__tool_directory__/bowtie2_index_builder.py'
12 '${out_file}' 11 '${out_file}'
13 --fasta_filename '${all_fasta_source.fields.path}' 12 --fasta_filename '${all_fasta_source.fields.path}'