Mercurial > repos > devteam > data_manager_bowtie2_index_builder
annotate tool_data_table_conf.xml.test @ 13:8bf75f813413 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 57d05675396f0b44265fb4dbc8f9f891c6073219
author | iuc |
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date | Thu, 05 Dec 2024 06:46:58 +0000 |
parents | bb050998cee2 |
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bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
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1 <tables> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
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2 <!-- Locations of indexes in the Bowtie2 mapper format --> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
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3 <table name="bowtie2_indexes" comment_char="#"> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
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4 <columns>value, dbkey, name, path</columns> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
5 <file path="${__HERE__}/test-data/bowtie2_indices.loc" /> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
6 </table> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
7 <!-- Locations of indexes in the Bowtie2 mapper format for TopHat2 to use --> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
8 <table name="tophat2_indexes" comment_char="#"> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
9 <columns>value, dbkey, name, path</columns> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
10 <file path="${__HERE__}/test-data/tophat2_indices.loc" /> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
11 </table> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
12 <!-- Locations of all fasta files under genome directory --> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
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13 <table name="all_fasta" comment_char="#"> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
14 <columns>value, dbkey, name, path</columns> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
15 <file path="${__HERE__}/test-data/all_fasta.loc" /> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
|
16 </table> |
bb050998cee2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bowtie2_index_builder commit 5dd2e762b5b84cec1c8344ecbeaf903e7dcc292e
iuc
parents:
diff
changeset
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17 </tables> |