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comparison test-data/cuffdiff_out3.txt @ 0:9a9e3e83889b draft

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author devteam
date Wed, 26 Nov 2014 13:57:28 -0500
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-1:000000000000 0:9a9e3e83889b
1 test_id gene_id gene locus sample_1 sample_2 status value_1 value_2 log2(fold_change) test_stat p_value q_value significant
2 TSS1 XLOC_000001 Xkr4 chr1:3204754-3204833 q1 q2 OK 0 9.45986e+06 inf -nan 0.01975 0.09875 no
3 TSS10 XLOC_000008 - chr1:3190858-3191434 q1 q2 OK 408511 420354 0.0412311 0.0469899 0.96715 0.96715 no
4 TSS11 XLOC_000009 - chr1:3191512-3192077 q1 q2 OK 433286 842157 0.958769 1.27887 0.20385 0.274413 no
5 TSS13 XLOC_000010 - chr1:3192250-3192336 q1 q2 OK 3.44151e+06 3.34455e+06 -0.0412311 -0.014084 0.67715 0.718189 no
6 TSS14 XLOC_000011 - chr1:3192441-3192494 q1 q2 OK 0 9.7002e+07 inf -nan 0.07975 0.181781 no
7 TSS15 XLOC_000012 - chr1:3192550-3192629 q1 q2 OK 0 4.72993e+06 inf -nan 0.12465 0.181781 no
8 TSS16 XLOC_000013 - chr1:3192649-3192676 q1 q2 NOTEST 0 0 0 0 1 1 no
9 TSS17 XLOC_000014 - chr1:3192731-3192811 q1 q2 NOTEST 0 0 0 0 1 1 no
10 TSS18 XLOC_000015 - chr1:3192940-3193042 q1 q2 OK 0 6.86386e+06 inf -nan 0.0612 0.181781 no
11 TSS19 XLOC_000016 - chr1:3194185-3194226 q1 q2 OK 0 2.43637e+08 inf -nan 0.12465 0.181781 no
12 TSS2 XLOC_000002 - chr1:3111449-3111490 q1 q2 OK 0 2.43637e+08 inf -nan 0.12465 0.181781 no
13 TSS20 XLOC_000017 - chr1:3194302-3194329 q1 q2 NOTEST 0 0 0 0 1 1 no
14 TSS21 XLOC_000018 - chr1:3194706-3194733 q1 q2 NOTEST 0 0 0 0 1 1 no
15 TSS22 XLOC_000019 - chr1:3195083-3195110 q1 q2 NOTEST 0 0 0 0 1 1 no
16 TSS23 XLOC_000020 - chr1:3195450-3195477 q1 q2 NOTEST 0 0 0 0 1 1 no
17 TSS24 XLOC_000021 - chr1:3197089-3197116 q1 q2 NOTEST 0 0 0 0 1 1 no
18 TSS25 XLOC_000022 - chr1:3197246-3197273 q1 q2 NOTEST 0 0 0 0 1 1 no
19 TSS26 XLOC_000023 - chr1:3197346-3197373 q1 q2 NOTEST 0 0 0 0 1 1 no
20 TSS27 XLOC_000024 - chr1:3197425-3197452 q1 q2 NOTEST 0 0 0 0 1 1 no
21 TSS28 XLOC_000025 - chr1:3200022-3200191 q1 q2 OK 826392 803108 -0.0412311 -0.0180163 0.8625 0.887868 no
22 TSS29 XLOC_000026 - chr1:3200325-3200352 q1 q2 NOTEST 0 0 0 0 1 1 no
23 TSS3 XLOC_000003 - chr1:3111545-3111576 q1 q2 NOTEST 0 0 0 0 1 1 no
24 TSS30 XLOC_000027 - chr1:3200430-3200457 q1 q2 NOTEST 0 0 0 0 1 1 no
25 TSS31 XLOC_000028 - chr1:3201007-3201039 q1 q2 NOTEST 0 0 0 0 1 1 no
26 TSS32 XLOC_000029 - chr1:3201077-3201481 q1 q2 OK 66791.3 324548 2.2807 1.1905 0.3026 0.383188 no
27 TSS33 XLOC_000030 - chr1:3201596-3201666 q1 q2 OK 1.6359e+07 0 -inf -nan 0.0148 0.09875 no
28 TSS34 XLOC_000031 - chr1:3201672-3201699 q1 q2 NOTEST 0 0 0 0 1 1 no
29 TSS35 XLOC_000032 - chr1:3201725-3201809 q1 q2 OK 1.5136e+07 0 -inf -nan 0.06005 0.181781 no
30 TSS36 XLOC_000033 Xkr4 chr1:3211521-3211561 q1 q2 NOTEST 0 0 0 0 1 1 no
31 TSS37 XLOC_000034 Xkr4 chr1:3212213-3212292 q1 q2 OK 0 9.45986e+06 inf -nan 0.01975 0.09875 no
32 TSS38 XLOC_000035 Xkr4 chr1:3212367-3212439 q1 q2 OK 0 2.80837e+07 inf -nan 0.0612 0.181781 no
33 TSS39 XLOC_000036 Xkr4 chr1:3212717-3212801 q1 q2 OK 3.784e+06 0 -inf -nan 0.12165 0.181781 no
34 TSS4 XLOC_000004 - chr1:3174765-3174792 q1 q2 NOTEST 0 0 0 0 1 1 no
35 TSS40 XLOC_000037 Xkr4 chr1:3213095-3213242 q1 q2 OK 5.10781e+06 2.08209e+06 -1.29467 -0.482193 0.5916 0.647062 no
36 TSS41 XLOC_000038 Xkr4 chr1:3240606-3240633 q1 q2 NOTEST 0 0 0 0 1 1 no
37 TSS42 XLOC_000039 Xkr4 chr1:3242479-3242512 q1 q2 NOTEST 0 0 0 0 1 1 no
38 TSS43 XLOC_000040 Xkr4 chr1:3242633-3242923 q1 q2 OK 48522.7 424400 3.12869 1.23747 0.38685 0.451325 no
39 TSS44 XLOC_000041 Xkr4 chr1:3242924-3243005 q1 q2 NOTEST 0 0 0 0 1 1 no
40 TSS45 XLOC_000042 Xkr4 chr1:3243018-3243079 q1 q2 OK 0 3.03053e+07 inf -nan 0.01975 0.09875 no
41 TSS46 XLOC_000043 Xkr4 chr1:3243108-3243154 q1 q2 OK 8.616e+07 0 -inf -nan 0.12165 0.181781 no
42 TSS47 XLOC_000044 Xkr4 chr1:3243347-3243401 q1 q2 OK 0 5.79991e+07 inf -nan 0.01975 0.09875 no
43 TSS48 XLOC_000045 Xkr4 chr1:3254079-3254106 q1 q2 NOTEST 0 0 0 0 1 1 no
44 TSS49 XLOC_000046 Xkr4 chr1:3256974-3257011 q1 q2 OK 0 2.35423e+09 inf -nan 0.01975 0.09875 no
45 TSS5 XLOC_000005 - chr1:3187401-3187428 q1 q2 NOTEST 0 0 0 0 1 1 no
46 TSS50 XLOC_000047 Xkr4 chr1:3277155-3277182 q1 q2 NOTEST 0 0 0 0 1 1 no
47 TSS51 XLOC_000048 Xkr4 chr1:3277190-3277218 q1 q2 NOTEST 0 0 0 0 1 1 no
48 TSS52 XLOC_000049 Xkr4 chr1:3277913-3278390 q1 q2 OK 228872 47662.2 -2.26362 -1.16262 0.30655 0.383188 no
49 TSS54 XLOC_000050 Xkr4 chr1:3280117-3280144 q1 q2 NOTEST 0 0 0 0 1 1 no
50 TSS55 XLOC_000051 Xkr4 chr1:3280498-3280525 q1 q2 NOTEST 0 0 0 0 1 1 no
51 TSS56 XLOC_000052 Xkr4 chr1:3280686-3280741 q1 q2 OK 0 2.61334e+07 inf -nan 0.12465 0.181781 no
52 TSS57 XLOC_000053 Xkr4 chr1:3282504-3282531 q1 q2 NOTEST 0 0 0 0 1 1 no
53 TSS58 XLOC_000054 Xkr4 chr1:3282650-3282677 q1 q2 NOTEST 0 0 0 0 1 1 no
54 TSS59 XLOC_000055 Xkr4 chr1:3282760-3282832 q1 q2 NOTEST 0 0 0 0 1 1 no
55 TSS6 XLOC_000006 - chr1:3188521-3188548 q1 q2 NOTEST 0 0 0 0 1 1 no
56 TSS60 XLOC_000056 Xkr4 chr1:3284966-3284993 q1 q2 NOTEST 0 0 0 0 1 1 no
57 TSS61 XLOC_000057 Xkr4 chr1:3290488-3290553 q1 q2 OK 0 1.11503e+07 inf -nan 0.12465 0.181781 no
58 TSS62 XLOC_000058 Xkr4 chr1:3290798-3290859 q1 q2 OK 1.55919e+07 0 -inf -nan 0.12165 0.181781 no
59 TSS63 XLOC_000059 Xkr4 chr1:3290919-3291273 q1 q2 OK 294879 85971.3 -1.7782 -0.902752 0.36915 0.445526 no
60 TSS65 XLOC_000060 Xkr4 chr1:3299443-3299664 q1 q2 OK 807732 156995 -2.36316 -0.933704 0.4205 0.474758 no
61 TSS66 XLOC_000060 Xkr4 chr1:3299443-3299664 q1 q2 NOTEST 0 0 0 0 1 1 no
62 TSS67 XLOC_000061 Xkr4 chr1:3299691-3299733 q1 q2 NOTEST 0 0 0 0 1 1 no
63 TSS68 XLOC_000062 Xkr4 chr1:3300051-3300078 q1 q2 NOTEST 0 0 0 0 1 1 no
64 TSS69 XLOC_000063 Xkr4 chr1:3307748-3307775 q1 q2 NOTEST 0 0 0 0 1 1 no
65 TSS7 XLOC_000007 - chr1:3189810-3190789 q1 q2 OK 358326 522345 0.543731 1.1445 0.1952 0.27328 no
66 TSS70 XLOC_000064 Xkr4 chr1:3318620-3318647 q1 q2 NOTEST 0 0 0 0 1 1 no
67 TSS71 XLOC_000065 Xkr4 chr1:3318999-3319051 q1 q2 NOTEST 0 0 0 0 1 1 no
68 TSS72 XLOC_000066 Xkr4 chr1:3330527-3330554 q1 q2 NOTEST 0 0 0 0 1 1 no
69 TSS73 XLOC_000067 Xkr4 chr1:3351240-3351311 q1 q2 OK 7.68169e+06 0 -inf -nan 0.12165 0.181781 no
70 TSS74 XLOC_000068 Xkr4 chr1:3355887-3356119 q1 q2 OK 504790 0 -inf -nan 0.04565 0.181781 no
71 TSS75 XLOC_000069 Xkr4 chr1:3356180-3356225 q1 q2 OK 1.02717e+08 0 -inf -nan 0.12165 0.181781 no
72 TSS76 XLOC_000070 Xkr4 chr1:3363076-3363176 q1 q2 OK 3.81001e+06 0 -inf -nan 0.0148 0.09875 no
73 TSS77 XLOC_000071 Xkr4 chr1:3363214-3363278 q1 q2 NOTEST 0 0 0 0 1 1 no
74 TSS78 XLOC_000072 Xkr4 chr1:3363387-3363446 q1 q2 OK 5.53654e+07 0 -inf -nan 0.0773 0.181781 no
75 TSS79 XLOC_000073 Xkr4 chr1:3363753-3363849 q1 q2 NOTEST 0 0 0 0 1 1 no
76 TSS80 XLOC_000074 Xkr4 chr1:3364871-3364919 q1 q2 OK 6.28966e+07 0 -inf -nan 0.12165 0.181781 no
77 TSS81 XLOC_000075 Xkr4 chr1:3367135-3367162 q1 q2 NOTEST 0 0 0 0 1 1 no
78 TSS82 XLOC_000076 Xkr4 chr1:3367210-3367237 q1 q2 NOTEST 0 0 0 0 1 1 no
79 TSS83 XLOC_000077 Xkr4 chr1:3367333-3367382 q1 q2 NOTEST 0 0 0 0 1 1 no
80 TSS84 XLOC_000078 Xkr4 chr1:3369580-3369607 q1 q2 NOTEST 0 0 0 0 1 1 no
81 TSS85 XLOC_000079 Xkr4 chr1:3375001-3375028 q1 q2 NOTEST 0 0 0 0 1 1 no
82 TSS86 XLOC_000080 Xkr4 chr1:3377211-3377262 q1 q2 NOTEST 0 0 0 0 1 1 no
83 TSS87 XLOC_000081 Xkr4 chr1:3379888-3379915 q1 q2 NOTEST 0 0 0 0 1 1 no
84 TSS88 XLOC_000082 Xkr4 chr1:3386739-3386836 q1 q2 NOTEST 0 0 0 0 1 1 no
85 TSS89 XLOC_000083 Xkr4 chr1:3391325-3391352 q1 q2 NOTEST 0 0 0 0 1 1 no
86 TSS90 XLOC_000084 Xkr4 chr1:3435841-3435880 q1 q2 NOTEST 0 0 0 0 1 1 no
87 TSS91 XLOC_000085 Xkr4 chr1:3447761-3447788 q1 q2 NOTEST 0 0 0 0 1 1 no
88 TSS92 XLOC_000086 Xkr4 chr1:3450906-3450965 q1 q2 NOTEST 0 0 0 0 1 1 no
89 TSS93 XLOC_000087 Xkr4 chr1:3451051-3451109 q1 q2 NOTEST 0 0 0 0 1 1 no