Mercurial > repos > devteam > cuffdiff
comparison cuffdiff_wrapper.xml @ 7:456797205473 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/cufflinks/cuffdiff commit 0e1d7660ab8ccb677b4f79207f5bc78097640f04"
| author | iuc |
|---|---|
| date | Sat, 27 Nov 2021 09:56:54 +0000 |
| parents | 986b6cbd0f59 |
| children | a10919766c11 |
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| 6:986b6cbd0f59 | 7:456797205473 |
|---|---|
| 281 </repeat> | 281 </repeat> |
| 282 </conditional> | 282 </conditional> |
| 283 <param name="fdr" value="0.05" /> | 283 <param name="fdr" value="0.05" /> |
| 284 <param name="min_alignment_count" value="0" /> | 284 <param name="min_alignment_count" value="0" /> |
| 285 <param name="do_bias_correction" value="No" /> | 285 <param name="do_bias_correction" value="No" /> |
| 286 <param name="do_normalization" value="No" /> | |
| 287 <param name="multiread_correct" value="No"/> | 286 <param name="multiread_correct" value="No"/> |
| 288 <param name="sAdditional" value="No"/> | 287 <param name="sAdditional" value="No"/> |
| 289 <output name="output_cummerbund" ftype="sqlite" file="cuffdiff_out.sqlite" compare="sim_size" /> | 288 <output name="output_cummerbund" ftype="sqlite" file="cuffdiff_out.sqlite" compare="sim_size" /> |
| 290 </test> | 289 </test> |
| 291 <test> | 290 <test> |
| 306 </param> | 305 </param> |
| 307 </conditional> | 306 </conditional> |
| 308 <param name="fdr" value="0.05" /> | 307 <param name="fdr" value="0.05" /> |
| 309 <param name="min_alignment_count" value="0" /> | 308 <param name="min_alignment_count" value="0" /> |
| 310 <param name="do_bias_correction" value="No" /> | 309 <param name="do_bias_correction" value="No" /> |
| 311 <param name="do_normalization" value="No" /> | |
| 312 <param name="multiread_correct" value="No"/> | 310 <param name="multiread_correct" value="No"/> |
| 313 <param name="sAdditional" value="No"/> | 311 <param name="sAdditional" value="No"/> |
| 314 <output name="output_cummerbund" ftype="sqlite" file="cuffdiff_out.sqlite" compare="sim_size" /> | 312 <output name="output_cummerbund" ftype="sqlite" file="cuffdiff_out.sqlite" compare="sim_size" /> |
| 315 </test> | 313 </test> |
| 316 <test> | 314 <test> |
| 331 </repeat> | 329 </repeat> |
| 332 </conditional> | 330 </conditional> |
| 333 <param name="fdr" value="0.05" /> | 331 <param name="fdr" value="0.05" /> |
| 334 <param name="min_alignment_count" value="0" /> | 332 <param name="min_alignment_count" value="0" /> |
| 335 <param name="do_bias_correction" value="No" /> | 333 <param name="do_bias_correction" value="No" /> |
| 336 <param name="do_normalization" value="No" /> | |
| 337 <param name="multiread_correct" value="No"/> | 334 <param name="multiread_correct" value="No"/> |
| 338 <param name="sAdditional" value="No"/> | 335 <param name="sAdditional" value="No"/> |
| 339 <output name="splicing_diff" file="splicing.diff"/> | 336 <output name="splicing_diff" file="splicing.diff"/> |
| 340 <output name="promoters_diff" file="promoters.diff"/> | 337 <output name="promoters_diff" file="promoters.diff"/> |
| 341 <output name="cds_diff" file="cds.diff"/> | 338 <output name="cds_diff" file="cds.diff"/> |