view test-data/cuffcompare_out1.tmap @ 2:a5674ddf2ad7 draft

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/cuffcompare commit eb18f691975ef9539b5ebd4f118343c8ad967a1f
author devteam
date Tue, 07 Feb 2017 18:37:50 -0500
parents d0d26169cc2a
children
line wrap: on
line source

ref_gene_id	ref_id	class_code	cuff_gene_id	cuff_id	FMI	FPKM	FPKM_conf_lo	FPKM_conf_hi	cov	len	major_iso_id	ref_match_len
-	-	u	CUFF.1	CUFF.1.1	100	20.607936	0.000000	49.751960	1.317073	41	CUFF.1.1	-
-	-	u	CUFF.3	CUFF.3.1	100	27.255658	0.000000	65.800979	1.741935	31	CUFF.3.1	-
-	-	u	CUFF.5	CUFF.5.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.5.1	-
-	-	u	CUFF.7	CUFF.7.1	100	9.999117	0.000000	19.998234	0.639053	169	CUFF.7.1	-
-	-	u	CUFF.9	CUFF.9.1	100	17.776896	9.153835	26.399957	1.136139	404	CUFF.9.1	-
-	-	u	CUFF.11	CUFF.11.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.11.1	-
Xkr4	Xkr4	c	CUFF.13	CUFF.13.1	100	10.695258	0.000000	25.820637	0.683544	79	CUFF.13.1	3634
Xkr4	Xkr4	i	CUFF.15	CUFF.15.1	100	10.695258	0.000000	25.820637	0.683544	79	CUFF.15.1	3634
Xkr4	Xkr4	i	CUFF.17	CUFF.17.1	100	8.710571	0.000000	21.029179	0.556701	97	CUFF.17.1	3634
Xkr4	Xkr4	i	CUFF.19	CUFF.19.1	100	29.337687	3.097262	55.578113	1.875000	72	CUFF.19.1	3634
Xkr4	Xkr4	i	CUFF.21	CUFF.21.1	100	13.851236	0.000000	33.439842	0.885246	61	CUFF.21.1	3634
Xkr4	Xkr4	i	CUFF.23	CUFF.23.1	100	23.470150	0.000000	50.571145	1.500000	54	CUFF.23.1	3634
Xkr4	Xkr4	i	CUFF.25	CUFF.25.1	100	14.567679	5.354270	23.781089	0.931034	290	CUFF.25.1	3634
Xkr4	Xkr4	i	CUFF.27	CUFF.27.1	100	34.253732	0.000000	73.806535	2.189189	37	CUFF.27.1	3634
-	-	u	CUFF.29	CUFF.29.1	100	107.103219	71.402146	142.804292	6.845070	142	CUFF.29.1	-
-	-	u	CUFF.31	CUFF.31.1	100	122.650461	40.883487	204.417435	7.838710	31	CUFF.31.1	-
-	-	u	CUFF.33	CUFF.33.1	100	109.527366	26.732460	192.322273	7.000000	27	CUFF.33.1	-
-	-	u	CUFF.35	CUFF.35.1	100	96.747183	61.420107	132.074259	6.183206	131	CUFF.35.1	-
-	-	u	CUFF.37	CUFF.37.1	100	104.085013	53.596365	154.573660	6.652174	69	CUFF.37.1	-
-	-	u	CUFF.39	CUFF.39.1	100	23.912983	0.000000	51.525317	1.528302	53	CUFF.39.1	-
-	-	u	CUFF.41	CUFF.41.1	100	10.695258	0.000000	25.820637	0.683544	79	CUFF.41.1	-
-	-	u	CUFF.43	CUFF.43.1	100	10.561567	0.000000	25.497879	0.675000	80	CUFF.43.1	-
-	-	u	CUFF.45	CUFF.45.1	100	20.708956	2.186303	39.231609	1.323529	102	CUFF.45.1	-
-	-	u	CUFF.47	CUFF.47.1	100	20.607936	0.000000	49.751960	1.317073	41	CUFF.47.1	-
-	-	u	CUFF.49	CUFF.49.1	100	15.646767	0.000000	46.940300	1.000000	27	CUFF.49.1	-
-	-	u	CUFF.51	CUFF.51.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.51.1	-
-	-	u	CUFF.53	CUFF.53.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.53.1	-
-	-	u	CUFF.55	CUFF.55.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.55.1	-
-	-	u	CUFF.57	CUFF.57.1	100	15.646767	0.000000	46.940300	1.000000	27	CUFF.57.1	-
-	-	u	CUFF.59	CUFF.59.1	100	15.646767	0.000000	46.940300	1.000000	27	CUFF.59.1	-
Xkr4	Xkr4	i	CUFF.61	CUFF.61.1	100	45.263860	0.000000	97.530065	2.892857	28	CUFF.61.1	3634
Xkr4	Xkr4	i	CUFF.63	CUFF.63.1	100	15.646767	0.000000	46.940300	1.000000	27	CUFF.63.1	3634
Xkr4	Xkr4	i	CUFF.65	CUFF.65.1	100	15.362280	0.000000	37.087825	0.981818	55	CUFF.65.1	3634
Xkr4	Xkr4	i	CUFF.67	CUFF.67.1	100	12.998852	0.000000	31.382005	0.830769	65	CUFF.67.1	3634
Xkr4	Xkr4	i	CUFF.69	CUFF.69.1	100	10.058636	0.000000	24.283695	0.642857	84	CUFF.69.1	3634
Xkr4	Xkr4	i	CUFF.71	CUFF.71.1	100	8.621688	0.000000	20.814595	0.551020	98	CUFF.71.1	3634
Xkr4	Xkr4	i	CUFF.73	CUFF.73.1	100	15.362280	0.000000	37.087825	0.981818	55	CUFF.73.1	3634
Xkr4	Xkr4	i	CUFF.75	CUFF.75.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.75.1	3634
Xkr4	Xkr4	i	CUFF.77	CUFF.77.1	100	16.248565	0.000000	39.227507	1.038462	52	CUFF.77.1	3634
Xkr4	Xkr4	i	CUFF.79	CUFF.79.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.79.1	3634
Xkr4	Xkr4	i	CUFF.81	CUFF.81.1	100	13.201959	0.000000	31.872349	0.843750	64	CUFF.81.1	3634
Xkr4	Xkr4	i	CUFF.83	CUFF.83.1	100	13.201959	0.000000	28.446269	0.843750	96	CUFF.83.1	3634
Xkr4	Xkr4	i	CUFF.85	CUFF.85.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.85.1	3634
Xkr4	Xkr4	i	CUFF.87	CUFF.87.1	100	17.243375	0.000000	41.629191	1.102041	49	CUFF.87.1	3634
Xkr4	Xkr4	i	CUFF.89	CUFF.89.1	100	16.567165	0.000000	39.996674	1.058824	51	CUFF.89.1	3634
Xkr4	Xkr4	i	CUFF.91	CUFF.91.1	100	31.293533	0.000000	75.549272	2.000000	27	CUFF.91.1	3634
Xkr4	Xkr4	i	CUFF.93	CUFF.93.1	100	21.664754	0.000000	52.303342	1.384615	39	CUFF.93.1	3634
Xkr4	Xkr4	i	CUFF.95	CUFF.95.1	100	46.940300	0.000000	101.142289	3.000000	27	CUFF.95.1	3634
Xkr4	Xkr4	i	CUFF.97	CUFF.97.1	100	21.481154	0.000000	46.285454	1.372881	59	CUFF.97.1	3634
Xkr4	Xkr4	i	CUFF.99	CUFF.99.1	100	14.567679	0.000000	35.169489	0.931034	58	CUFF.99.1	3634