Mercurial > repos > devteam > compute_q_values
changeset 1:f74ef191a772 draft
Uploaded
| author | devteam |
|---|---|
| date | Wed, 21 Aug 2013 12:42:27 -0400 |
| parents | b617b4b3d913 |
| children | d73e13ce8feb |
| files | compute_q_values.xml tool_dependencies.xml |
| diffstat | 2 files changed, 13 insertions(+), 1 deletions(-) [+] |
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--- a/compute_q_values.xml Tue Aug 20 09:34:16 2013 -0400 +++ b/compute_q_values.xml Wed Aug 21 12:42:27 2013 -0400 @@ -1,6 +1,9 @@ <tool id="compute_q_values" name="Compute q-values" version="1.0.1"> <description>based on multiple simultaneous tests p-values</description> - + <requirements> + <requirement type="package" version="2.11.0">R</requirement> + <requirement type="package" version="1.34.0">bioc_qvalue</requirement> + </requirements> <command interpreter="perl"> compute_q_values.pl $inputFile1 $inputLambda2 $inputPI0_method3 $inputFDR_level4 $inputRobust5 $outputFile1 $outputFile2 </command>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed Aug 21 12:42:27 2013 -0400 @@ -0,0 +1,9 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="R" version="2.11.0"> + <repository changeset_revision="df2d1c96d0e9" name="package_r_2_11_0" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="bioc_qvalue" version="1.34.0"> + <repository changeset_revision="a02c837d46ce" name="package_bioc_qvalue_1_34_0" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> +</tool_dependency>