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1 deletionHoptspot1 [A/C][G/T][A/G][A/G]GT
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2 deletionHoptspot1rev TG[A/G][A/G][G/T][A/C]
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3 deletionHoptspot1comp [G/T][A/C][C/T][C/T]CA
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4 deletionHoptspot1revcomp AC[C/T][C/T][A/C][G/T]
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5 deletionHoptspot2 [C/T][C/T][C/T]TG
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6 deletionHoptspot2rev GT[C/T][C/T][C/T]
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7 deletionHoptspot2comp [A/G][A/G][A/G]AC
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8 deletionHoptspot2revcomp CA[A/G][A/G][A/G]
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9 deletionHoptspot3 CAG[A/G]
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10 deletionHoptspot3rev [A/G]GAC
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11 deletionHoptspot3comp GTC[C/T]
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12 deletionHoptspot3revcomp [C/T]CTG
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13 dnaPolPauseFrameshift1 GAG
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14 dnaPolPauseFrameshift1comp CTC
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15 dnaPolPauseFrameshift2 ACG
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16 dnaPolPauseFrameshift2rev GCA
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17 dnaPolPauseFrameshift2comp TGC
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18 dnaPolPauseFrameshift2revcomp CGT
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19 dnaPolPauseFrameshift3 GC[G/C]
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20 dnaPolPauseFrameshift3rev [G/C]CG
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21 dnaPolPauseFrameshift3comp CG[G/C]
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22 dnaPolPauseFrameshift3revcomp [G/C]GC
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23 dnaPolPauseFrameshift4 [A/T]GGAG
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24 dnaPolPauseFrameshift4rev GAGG[A/T]
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25 dnaPolPauseFrameshift4comp [A/T]CCTC
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26 dnaPolPauseFrameshift4revcomp CTCC[A/T]
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27 dnaPolPauseFrameshift5 TCCCCC
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28 dnaPolPauseFrameshift5rev CCCCCT
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29 dnaPolPauseFrameshift5comp AGGGGG
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30 dnaPolPauseFrameshift5revcomp GGGGGA
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31 dnaPolPauseFrameshift6 CTGGCG
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32 dnaPolPauseFrameshift6rev GCGGTC
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33 dnaPolPauseFrameshift6comp GACCGC
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34 dnaPolPauseFrameshift6revcomp CGCCAG
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35 dnaPolPauseFrameshift7 ACCC[A/T][A/G]
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36 dnaPolPauseFrameshift7rev [A/G][A/T]CCCA
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37 dnaPolPauseFrameshift7comp TGGG[A/T][T/C]
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38 dnaPolPauseFrameshift7revcomp [T/C][A/T]GGGT
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39 dnaPolPauseFrameshift8 TTTT
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40 dnaPolPauseFrameshift8comp AAAA
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41 dnaPolPauseFrameshift9 TGG[A/C/G/T]GT
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42 dnaPolPauseFrameshift9rev TG[A/C/G/T]GGT
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43 dnaPolPauseFrameshift9comp ACC[A/C/G/T]CA
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44 dnaPolPauseFrameshift9revcomp AC[A/C/G/T]CCA
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45 dnaPolPauseFrameshift10 ACCCCA
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46 dnaPolPauseFrameshift10comp TGGGGT
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47 indelHotspot1 GTAAGT
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48 indelHotspot1rev TGAATG
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49 indelHotspot1comp CATTCA
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50 indelHotspot1revcomp ACTTAC
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51 insertionHotspot1 AT[A/C][A/C]GCC
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52 insertionHotspot1rev CCG[A/C][A/C]TA
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53 insertionHotspot1comp TA[T/G][T/G]CGG
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54 insertionHotspot1revcomp GGC[T/G][T/G]AT
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55 insertionHotspot2 TACC[A/G]C
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56 insertionHotspot2rev C[A/G]CCAT
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57 insertionHotspot2comp ATGG[T/C]G
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58 insertionHotspot2revcomp G[T/C]GGTA
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59 topoisomeraseCleavageSite1 CAT
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60 topoisomeraseCleavageSite1rev TAC
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61 topoisomeraseCleavageSite1comp GTA
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62 topoisomeraseCleavageSite1revcomp ATG
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63 topoisomeraseCleavageSite2 CT[T/C]
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64 topoisomeraseCleavageSite2rev [T/C]TC
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65 topoisomeraseCleavageSite2comp GA[A/G]
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66 topoisomeraseCleavageSite2revcomp [A/G]AG
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67 topoisomeraseCleavageSite3 GT[T/C]
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68 topoisomeraseCleavageSite3rev [T/C]TG
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69 topoisomeraseCleavageSite3comp CA[A/G]
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70 topoisomeraseCleavageSite3revcomp [A/G]AC
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71 topoisomeraseCleavageSite4 [A/G]A[T/G]
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72 topoisomeraseCleavageSite4rev [T/G]A[A/G]
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73 topoisomeraseCleavageSite4comp [T/C]T[A/C]
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74 topoisomeraseCleavageSite4revcomp [A/C]T[T/C]
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75 topoisomeraseCleavageSite5 [T/C]CCTT
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76 topoisomeraseCleavageSite5rev TTCC[T/C]
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77 topoisomeraseCleavageSite5comp [A/G]GGAA
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78 topoisomeraseCleavageSite5revcomp AAGG[A/G]
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79 topoisomeraseCleavageSite6 [T/C]TA
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80 topoisomeraseCleavageSite6rev AT[T/C]
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81 topoisomeraseCleavageSite6comp [A/G]AT
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82 topoisomeraseCleavageSite6revcomp TA[A/G]
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83 translinTarget1 ATGCAG
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84 translinTarget1rev GACGTA
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85 translinTarget1comp TACGTC
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86 translinTarget1revcomp CTGCAT
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87 translinTarget2 GCCC[A/T][G/C][G/C][A/T]
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88 translinTarget2rev [A/T][G/C][G/C][A/T]CCCG
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89 translinTarget2comp CGGG[A/T][G/C][G/C][A/T]
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90 translinTarget2revcomp [A/T][G/C][G/C][A/T]GGGC
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91 vDjRecombinationSignal1 CACAGTG
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92 vDjRecombinationSignal1rev GTGACAC
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93 vDjRecombinationSignal1comp GTGTCAC
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94 vDjRecombinationSignal1revcomp CACTGTG
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95 vDjRecombinationSignal2 ACAAAAACC
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96 vDjRecombinationSignal2rev CCAAAAACA
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97 vDjRecombinationSignal2comp TGTTTTTGG
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98 vDjRecombinationSignal2revcomp GGTTTTTGT
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99 x-likeSite1 CCG
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100 x-likeSite1rev GCC
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101 x-likeSite1comp GGC
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102 x-likeSite1revcomp CGG
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103 x-likeSite2 GCTGGTGG
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104 x-likeSite2rev GGTGGTCG
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105 x-likeSite2comp CGACCACC
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106 x-likeSite2revcomp CCACCAGC
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107 x-likeSite3 GGGCAGGA[A/C/G/T]G
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108 x-likeSite3rev G[A/C/G/T]AGGACGGG
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109 x-likeSite3comp CCCGTCCT[A/C/G/T]C
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110 x-likeSite3revcomp C[A/C/G/T]TCCTGCCC
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111 x-likeSite4 GC[A/T]GG[A/T]GG
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112 x-likeSite4rev GG[A/T]GG[A/T]CG
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113 x-likeSite4comp CG[A/T]CC[A/T]CC
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114 x-likeSite4revcomp CC[A/T]CC[A/T]GC
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115 x-likeSite5 GGAGGTGGGCAGGA[A/G]G
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116 x-likeSite5rev G[A/G]AGGACGGGTGGAGG
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117 x-likeSite5comp CCTCCACCCGTCCT[T/C]C
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118 x-likeSite5revcomp C[T/C]TCCTGCCCACCTCC
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119 x-likeSite6 AGAGGTGGGCAGGTGG
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120 x-likeSite6rev GGTGGACGGGTGGAGA
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121 x-likeSite6comp TCTCCACCCGTCCACC
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122 x-likeSite6revcomp CCACCTGCCCACCTCT
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