# HG changeset patch
# User devteam
# Date 1450482727 18000
# Node ID c8b83c5494dbc49729bcb31eeb6103d419ca781c
# Parent  c45a263664fd5167cc82fc8c90619c69932e986e
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/cd_hit_dup commit de7140295cce07e1bc1697e51dab4271c8d7a8a6

diff -r c45a263664fd -r c8b83c5494db cd_hit_dup.xml
--- a/cd_hit_dup.xml	Mon Nov 09 11:21:40 2015 -0500
+++ b/cd_hit_dup.xml	Fri Dec 18 18:52:07 2015 -0500
@@ -98,6 +98,10 @@
 
 cd-hit-dup is a simple tool for removing duplicates from sequencing reads, with optional step to detect and remove chimeric reads. 
 
+.. class:: infomark
+
+**TIP:** Chimeric filtering is only available on single-ended, or joined paired-end, reads.
+
 **Options**
 
 cd-hit-dup provides a number of options to tune how the duplicates are removed::
@@ -113,7 +117,6 @@
  -b     Abundance ratio between a parent read and a chimeric read (default 1)
  -p     Dissimilarity control for chimeric filtering (default 1)
 
-
         ]]>
     </help>
     <citations>