# HG changeset patch
# User devteam
# Date 1444752859 14400
# Node ID bbfd1fbff28a22fdcf57a8831109163d1f589090
# Parent  2534ec7b3d4f91ee865b657bc417369a35840b8e
planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734

diff -r 2534ec7b3d4f -r bbfd1fbff28a ccat_wrapper.xml
--- a/ccat_wrapper.xml	Thu Jan 23 12:31:25 2014 -0500
+++ b/ccat_wrapper.xml	Tue Oct 13 12:14:19 2015 -0400
@@ -140,9 +140,10 @@
 
 **Citation**
 
-For the underlying tool, please cite `Xu H, Handoko L, Wei X, Ye C, Sheng J, Wei CL, Lin F, Sung WK. A signal-noise model for significance analysis of ChIP-seq with negative control. Bioinformatics. 2010 May 1;26(9):1199-204. <http://www.ncbi.nlm.nih.gov/pubmed/20371496>`_
-
 If you use this tool in Galaxy, please cite Blankenberg D, et al. *In preparation.*
 
   </help>
+  <citations>
+    <citation type="doi">10.1093/bioinformatics/btq128</citation>
+  </citations>
 </tool>
diff -r 2534ec7b3d4f -r bbfd1fbff28a tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Jan 23 12:31:25 2014 -0500
+++ b/tool_dependencies.xml	Tue Oct 13 12:14:19 2015 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
   <package name="CCAT" version="3.0">
-      <repository changeset_revision="bf3346b28104" name="package_ccat_3_0" owner="devteam" prior_installation_required="False" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+      <repository changeset_revision="bf3346b28104" name="package_ccat_3_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>