Mercurial > repos > devteam > blast_datatypes
comparison README.rst @ 13:e96b515847dd draft
v0.0.21 - Updated citation information with GigaScience paper
| author | peterjc |
|---|---|
| date | Fri, 04 Sep 2015 07:09:45 -0400 |
| parents | da92fef90117 |
| children | 623a3fbe5340 |
comparison
equal
deleted
inserted
replaced
| 12:da92fef90117 | 13:e96b515847dd |
|---|---|
| 45 with makeprofiledb and rpsblast (contribution from Bjoern Gruening). | 45 with makeprofiledb and rpsblast (contribution from Bjoern Gruening). |
| 46 - Add ``pssm-asn1`` datatype for Position Specific Scoring Matrices | 46 - Add ``pssm-asn1`` datatype for Position Specific Scoring Matrices |
| 47 (PSSMs) stored in NCBI's "scoremat" ASN.1 format (usually named | 47 (PSSMs) stored in NCBI's "scoremat" ASN.1 format (usually named |
| 48 as ``*.smp``), used as input files for makeprofiledb. | 48 as ``*.smp``), used as input files for makeprofiledb. |
| 49 v0.0.20 - Added "NCBI BLAST+ integrated into Galaxy" preprint citation. | 49 v0.0.20 - Added "NCBI BLAST+ integrated into Galaxy" preprint citation. |
| 50 v0.0.21 - Updated citation information with GigaScience paper. | |
| 50 ======= ====================================================================== | 51 ======= ====================================================================== |
| 51 | 52 |
| 52 | 53 |
| 53 Installation | 54 Installation |
| 54 ============ | 55 ============ |
| 120 | 121 |
| 121 | 122 |
| 122 Citation | 123 Citation |
| 123 ======== | 124 ======== |
| 124 | 125 |
| 125 Please cite the following paper (currently available as a preprint): | 126 Please cite the following paper: |
| 126 | 127 |
| 127 NCBI BLAST+ integrated into Galaxy. | 128 NCBI BLAST+ integrated into Galaxy. |
| 128 P.J.A. Cock, J.M. Chilton, B. Gruening, J.E. Johnson, N. Soranzo | 129 P.J.A. Cock, J.M. Chilton, B. Gruening, J.E. Johnson, N. Soranzo |
| 129 bioRxiv DOI: http://dx.doi.org/10.1101/014043 (preprint) | 130 *GigaScience* 2015, 4:39 |
| 131 DOI: http://dx.doi.org/10.1186/s13742-015-0080-7 | |
| 130 | 132 |
| 131 | 133 |
| 132 Licence (MIT) | 134 Licence (MIT) |
| 133 ============= | 135 ============= |
| 134 | 136 |