diff bamtools-filter.xml @ 8:709d8669e8d6 draft

planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734

--- a/bamtools-filter.xml	Wed Aug 26 17:20:39 2015 -0400
+++ b/bamtools-filter.xml	Tue Oct 13 12:36:56 2015 -0400
@@ -56,10 +56,10 @@
             <param name="bam_property_value" type="integer" value="3" label="Filter on this alignment flag" help="Default (3) is for a paired read mapped in a proper pair"/>
           </when>
           <when value="cigar">
-            <param name="bam_property_value" type="text" size="10" value="101M" label="Filter on this CIGAR string" help="Default (101M) is for 101 continuously matched bases"/>
+            <param name="bam_property_value" type="text" value="101M" label="Filter on this CIGAR string" help="Default (101M) is for 101 continuously matched bases"/>
           </when>
           <when value="insertSize">
-            <param name="bam_property_value" type="text" size="10" value=">=250" label="Filter on inster size" help="You can use &gt;, &lt;, =, and ! (not) in your expression. E.g., to select pairs with inster size above 250 nt use &quot;>=250&quot;">
+            <param name="bam_property_value" type="text" value=">=250" label="Filter on inster size" help="You can use &gt;, &lt;, =, and ! (not) in your expression. E.g., to select pairs with inster size above 250 nt use &quot;>=250&quot;">
               <sanitizer invalid_char="">
                 <valid initial="string.letters,string.digits"><add value="&gt;"/><add value="&lt;"/><add value="!="/></valid>
               </sanitizer>
@@ -161,7 +161,7 @@
     <conditional name="rule_configuration">
       <param name="rules_selector" type="boolean" truevalue="true" falsevalue="false" label="Would you like to set rules?" help="Allows complex logical constructs. See Example 4 below." />
       <when value="true">
-        <param name="rules" type="text" size="20" label="Enter rules here" help="This option can only be used with at least two conditions. Read help below (Example 4) to understand how it works." >
+        <param name="rules" type="text" label="Enter rules here" help="This option can only be used with at least two conditions. Read help below (Example 4) to understand how it works." >
           <sanitizer invalid_char="">
             <valid initial="string.printable"/>
           </sanitizer>