Mercurial > repos > devteam > annotation_profiler
diff tool-data/annotation_profiler_options.xml.sample @ 0:4414f0739808 draft default tip
Imported from capsule None
| author | devteam |
|---|---|
| date | Mon, 19 May 2014 10:59:42 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/annotation_profiler_options.xml.sample Mon May 19 10:59:42 2014 -0400 @@ -0,0 +1,1101 @@ +<filter type="data_meta" data_ref="input1" meta_key="dbkey" value="hg18"> + <options> + <option name="Mapping and Sequencing Tracks" value="group-map"> + <option name="STS Markers" value="stsMap"/> + <option name="Fosmid End Pairs" value="fosEndPairs"/> + <option name="Chromosome Band" value="cytoBand"/> + <option name="BAC End Pairs" value="bacEndPairs"/> + <option name="FISH Clones" value="fishClones"/> + <option name="GC Percent" value="gc5Base"/> + <option name="Coverage" value="clonePos"/> + <option name="Recomb Rate" value="recombRate"/> + <option name="Map Contigs" value="ctgPos"/> + <option name="Assembly" value="gold"/> + <option name="Gap" value="gap"/> + <option name="Chromosome Band (Ideogram)" value="cytoBandIdeo"/> + </option> + <option name="Comparative Genomics" value="group-compGeno"> + <option name="chainRn4" value="chainRn4"/> + <option name="chainOryLat1" value="chainOryLat1"/> + <option name="chainTetNig1" value="chainTetNig1"/> + <option name="netDanRer5" value="netDanRer5"/> + <option name="netPanTro2" value="netPanTro2"/> + <option name="chainCanFam2" value="chainCanFam2"/> + <option name="netPonAbe2" value="netPonAbe2"/> + <option name="netGasAcu1" value="netGasAcu1"/> + <option name="netStrPur2" value="netStrPur2"/> + <option name="chainDanRer5" value="chainDanRer5"/> + <option name="netGalGal3" value="netGalGal3"/> + <option name="netMonDom4" value="netMonDom4"/> + <option name="netOryLat1" value="netOryLat1"/> + <option name="netMm9" value="netMm9"/> + <option name="chainRheMac2" value="chainRheMac2"/> + <option name="netOrnAna1" value="netOrnAna1"/> + <option name="chainFr2" value="chainFr2"/> + <option name="netXenTro2" value="netXenTro2"/> + <option name="Cons Indels MmCf" value="consIndelsHgMmCanFam"/> + <option name="Tetraodon Ecores" value="ecoresTetNig1"/> + <option name="netTetNig1" value="netTetNig1"/> + <option name="chainGalGal3" value="chainGalGal3"/> + <option name="chainStrPur2" value="chainStrPur2"/> + <option name="chainOrnAna1" value="chainOrnAna1"/> + <option name="netFelCat3" value="netFelCat3"/> + <option name="chainEquCab1" value="chainEquCab1"/> + <option name="chainPonAbe2" value="chainPonAbe2"/> + <option name="chainFelCat3" value="chainFelCat3"/> + <option name="mostConserved28way" value="subtracks-mostConserved28way"> + <option name="Most Conserved" value="mostConserved28way"/> + <option name="Vertebrate" value="phastConsElements28way"/> + <option name="Mammal" value="phastConsElements28wayPlacMammal"/> + </option> + <option name="chainAnoCar1" value="chainAnoCar1"/> + <option name="17-Way Cons" value="multiz17way"/> + <option name="chainXenTro2" value="chainXenTro2"/> + <option name="17-Way Most Cons" value="phastConsElements17way"/> + <option name="chainGasAcu1" value="chainGasAcu1"/> + <option name="Conservation" value="multiz28way"/> + <option name="chainCalJac1" value="chainCalJac1"/> + <option name="netCanFam2" value="netCanFam2"/> + <option name="chainMm9" value="chainMm9"/> + <option name="chainMonDom4" value="chainMonDom4"/> + <option name="netCalJac1" value="netCalJac1"/> + <option name="netRheMac2" value="netRheMac2"/> + <option name="chainPanTro2" value="chainPanTro2"/> + <option name="netEquCab1" value="netEquCab1"/> + <option name="netFr2" value="netFr2"/> + <option name="netAnoCar1" value="netAnoCar1"/> + <option name="netBosTau4" value="netBosTau4"/> + <option name="chainBosTau4" value="chainBosTau4"/> + <option name="netRn4" value="netRn4"/> + </option> + <option name="Phenotype and Disease Associations" value="group-phenDis"> + <option name="caseControl" value="subtracks-caseControl"> + <option name="Case Control" value="caseControl"/> + <option name="CCC Bipolar Dis" value="cccTrendPvalBd"/> + <option name="CCC Coronary Art" value="cccTrendPvalCad"/> + <option name="CCC Crohns Dis" value="cccTrendPvalCd"/> + <option name="CCC Hypertension" value="cccTrendPvalHt"/> + <option name="CCC Rheum Arth" value="cccTrendPvalRa"/> + <option name="CCC T1 Diabetes" value="cccTrendPvalT1d"/> + <option name="CCC T2 Diabetes" value="cccTrendPvalT2d"/> + </option> + <option name="GAD View" value="gad"/> + <option name="RGD Human QTL" value="rgdQtl"/> + <option name="RGD Rat QTL" value="rgdRatQtl"/> + <option name="nimhBipolar" value="subtracks-nimhBipolar"> + <option name="NIMH Bipolar" value="nimhBipolar"/> + <option name="NIMH Bipolar De" value="nimhBipolarDe"/> + <option name="NIMH Bipolar Us" value="nimhBipolarUs"/> + </option> + <option name="jaxQtlMapped" value="subtracks-jaxQtlMapped"> + <option name="MGI Mouse QTL" value="jaxQtlAsIs"/> + <option name="MGI Mouse QTL" value="jaxQtlMapped"/> + <option name="MGI Mouse QTL Padded" value="jaxQtlPadded"/> + </option> + </option> + <option name="mRNA and EST Tracks" value="group-rna"> + <option name="CGAP SAGE" value="cgapSage"/> + <option name="est" value="est"/> + <option name="UniGene" value="uniGene_3"/> + <option name="Gene Bounds" value="rnaCluster"/> + <option name="SIB Alt-Splicing" value="sibTxGraph"/> + <option name="Spliced ESTs" value="intronEst"/> + <option name="Other mRNAs" value="xenoMrna"/> + <option name="H-Inv" value="HInvGeneMrna"/> + <option name="mrna" value="mrna"/> + <option name="polyA" value="subtracks-polyA"> + <option name="Poly(A)" value="polyA"/> + <option name="PolyA_DB" value="polyaDb"/> + <option name="Poly(A) SVM" value="polyaPredict"/> + </option> + <option name="Other ESTs" value="xenoEst"/> + </option> + <option name="Genes and Gene Prediction Tracks" value="group-genes"> + <option name="CCDS" value="ccdsGene"/> + <option name="augustus" value="subtracks-augustus"> + <option name="Augustus" value="augustus"/> + <option name="Augustus Ab Initio" value="augustusAbinitio"/> + <option name="Augustus Hints" value="augustusHints"/> + <option name="Augustus De Novo" value="augustusXRA"/> + </option> + <option name="sno/miRNA" value="wgRna"/> + <option name="Geneid Genes" value="geneid"/> + <option name="SIB Genes" value="sibGene"/> + <option name="Old Known Genes" value="knownGeneOld2"/> + <option name="EvoFold" value="evofold"/> + <option name="CONTRAST" value="contrastGene"/> + <option name="Exoniphy" value="exoniphy"/> + <option name="AceView Genes" value="acembly"/> + <option name="nscan" value="subtracks-nscan"> + <option name="N-SCAN" value="nscan"/> + <option name="N-SCAN" value="nscanGene"/> + <option name="N-SCAN PASA-EST" value="nscanPasaGene"/> + </option> + <option name="Ensembl Genes" value="ensGene"/> + <option name="SGP Genes" value="sgpGene"/> + <option name="RefSeq Genes" value="refGene"/> + <option name="Genscan Genes" value="genscan"/> + <option name="RNA Genes" value="rnaGene"/> + <option name="UCSC Genes" value="knownGene"/> + <option name="ACEScan" value="acescan"/> + <option name="Other RefSeq" value="xenoRefGene"/> + <option name="Alt Events" value="knownAlt"/> + <option name="ORFeome Clones" value="orfeomeGenes"/> + <option name="MGC Genes" value="mgcGenes"/> + </option> + <option name="Variation and Repeats" value="group-varRep"> + <option name="Segmental Dups" value="genomicSuperDups"/> + <option name="Structural Var" value="cnp"/> + <option name="tajdSnp" value="subtracks-tajdSnp"> + <option name="Tajima's D SNPs" value="tajdSnp"/> + <option name="SNPs AD" value="tajdSnpAd"/> + <option name="SNPs ED" value="tajdSnpEd"/> + <option name="SNPs XD" value="tajdSnpXd"/> + </option> + <option name="Self Chain" value="chainSelf"/> + <option name="RepeatMasker" value="rmsk"/> + <option name="snpArray" value="subtracks-snpArray"> + <option name="SNP Arrays" value="snpArray"/> + <option name="Affy 250KNsp" value="snpArrayAffy250Nsp"/> + <option name="Affy 250KSty" value="snpArrayAffy250Sty"/> + <option name="Affy SNP 5.0" value="snpArrayAffy5"/> + <option name="Affy SNP 6.0" value="snpArrayAffy6"/> + <option name="Affy SNP 6.0 SV" value="snpArrayAffy6SV"/> + <option name="Illumina 300" value="snpArrayIllumina300"/> + <option name="Illumina 550" value="snpArrayIllumina550"/> + <option name="Illumina 650" value="snpArrayIllumina650"/> + </option> + <option name="hapmapLdPh" value="subtracks-hapmapLdPh"> + <option name="HapMap LD Phased" value="hapmapLdPh"/> + <option name="Phased CEU" value="hapmapLdPhCeu"/> + <option name="Ph JPT+CHB" value="hapmapLdPhChbJpt"/> + <option name="Phased YRI" value="hapmapLdPhYri"/> + </option> + <option name="SNPs (126)" value="snp126"/> + <option name="Interrupted Rpts" value="nestedRepeats"/> + <option name="Exapted Repeats" value="exaptedRepeats"/> + <option name="SNPs (128)" value="snp128"/> + <option name="tajD" value="subtracks-tajD"> + <option name="Tajima's D" value="tajD"/> + <option name="Tajima's D AD" value="tajdAd"/> + <option name="Tajima's D ED" value="tajdEd"/> + <option name="Tajima's D XD" value="tajdXd"/> + </option> + <option name="Microsatellite" value="microsat"/> + <option name="Simple Repeats" value="simpleRepeat"/> + <option name="hapmapSnps" value="subtracks-hapmapSnps"> + <option name="Chimp Alleles" value="hapmapAllelesChimp"/> + <option name="Macaque Alleles" value="hapmapAllelesMacaque"/> + <option name="HapMap SNPs" value="hapmapSnps"/> + <option name="SNPs CEU" value="hapmapSnpsCEU"/> + <option name="SNPs CHB" value="hapmapSnpsCHB"/> + <option name="SNPs JPT" value="hapmapSnpsJPT"/> + <option name="SNPs YRI" value="hapmapSnpsYRI"/> + </option> + </option> + <option name="Expression and Regulation" value="group-regulation"> + <option name="FirstEF" value="firstEF"/> + <option name="Affy GNF1H" value="affyGnf1h"/> + <option name="Affy All Exon" value="affyHumanExon"/> + <option name="wgEncodeUcsdNgTaf1Sites" value="subtracks-wgEncodeUcsdNgTaf1Sites"> + <option name="TAF1 Known Sites" value="wgEncodeUcsdNgTaf1KnownSites"/> + <option name="TAF1 Novel Sites" value="wgEncodeUcsdNgTaf1NovelSites"/> + <option name="LI TAF1 Sites" value="wgEncodeUcsdNgTaf1Sites"/> + </option> + <option name="wgEncodeUcsdNgTaf1Valid" value="subtracks-wgEncodeUcsdNgTaf1Valid"> + <option name="LI TAF1 Valid" value="wgEncodeUcsdNgTaf1Valid"/> + <option name="LI Valid H3K4m2" value="wgEncodeUcsdNgTaf1ValidH3K4me"/> + <option name="LI Valid H3ac" value="wgEncodeUcsdNgTaf1ValidH3ac"/> + <option name="LI Valid Pol2" value="wgEncodeUcsdNgTaf1ValidRnap"/> + <option name="LI Valid TAF1" value="wgEncodeUcsdNgTaf1ValidTaf"/> + </option> + <option name="LI TAF1 Signal" value="wgEncodeUcsdNgTaf1Signal"/> + <option name="Affy Txn" value="affyTxnPhase3Super"/> + <option name="affyTxnPhase3L" value="subtracks-affyTxnPhase3L"> + <option name="HDF lRNA" value="affyTxnPhase3HDF"/> + <option name="HeLa Cyto lRNA" value="affyTxnPhase3HeLaCyto"/> + <option name="HeLa Nucl lRNA" value="affyTxnPhase3HeLaNuclear"/> + <option name="HepG2 Cyto lRNA" value="affyTxnPhase3HepG2Cyto"/> + <option name="HepG2 Nucl lRNA" value="affyTxnPhase3HepG2Nuclear"/> + <option name="Jurkat lRNA" value="affyTxnPhase3Jurkat"/> + <option name="Affy Tx lRNA Sig" value="affyTxnPhase3L"/> + <option name="NCCIT lRNA" value="affyTxnPhase3NCCIT"/> + <option name="PC3 lRNA" value="affyTxnPhase3PC3"/> + <option name="SK-N-AS lRNA" value="affyTxnPhase3SK_N_AS"/> + <option name="U87MG lRNA" value="affyTxnPhase3U87MG"/> + </option> + <option name="SwitchGear TSS" value="switchDbTss"/> + <option name="LI/UCSD TAF1" value="wgEncodeUcsdNgTaf1Super"/> + <option name="Affy U133Plus2" value="affyU133Plus2"/> + <option name="GNF Ratio" value="affyRatio"/> + <option name="Affy HuEx 1.0" value="affyHuEx1"/> + <option name="affyTxnPhase3FragsS" value="subtracks-affyTxnPhase3FragsS"> + <option name="HeLa - sRNA" value="affyTxnPhase3FragsHeLaBottomStrand"/> + <option name="HeLa + sRNA" value="affyTxnPhase3FragsHeLaTopStrand"/> + <option name="HepG2 - sRNA" value="affyTxnPhase3FragsHepG2BottomStrand"/> + <option name="HepG2 + sRNA" value="affyTxnPhase3FragsHepG2TopStrand"/> + <option name="Affy Tx sRNA Reg" value="affyTxnPhase3FragsS"/> + </option> + <option name="7X Reg Potential" value="regPotential7X"/> + <option name="uppsalaChipSites" value="subtracks-uppsalaChipSites"> + <option name="UU H3ac Sites" value="uppsalaChipH3acSites"/> + <option name="UU ChIP Sites" value="uppsalaChipSites"/> + <option name="UU Usf1 Sites" value="uppsalaChipUsf1Sites"/> + <option name="UU Usf2 Sites" value="uppsalaChipUsf2Sites"/> + </option> + <option name="CpG Islands" value="cpgIslandExt"/> + <option name="GIS PET" value="wgEncodeGisSuper"/> + <option name="GNF Atlas 2" value="gnfAtlas2"/> + <option name="Vista Enhancers" value="vistaEnhancers"/> + <option name="affyTxnPhase3S" value="subtracks-affyTxnPhase3S"> + <option name="HeLa - sRNA" value="affyTxnPhase3HeLaBottomStrand"/> + <option name="HeLa + sRNA" value="affyTxnPhase3HeLaTopStrand"/> + <option name="HepG2 - sRNA" value="affyTxnPhase3HepG2BottomStrand"/> + <option name="HepG2 + sRNA" value="affyTxnPhase3HepG2TopStrand"/> + <option name="Affy Tx sRNA Sig" value="affyTxnPhase3S"/> + </option> + <option name="wgEncodeGisRnaPet" value="subtracks-wgEncodeGisRnaPet"> + <option name="GIS PET RNA" value="wgEncodeGisRnaPet"/> + <option name="GIS RNA HCT116" value="wgEncodeGisRnaPetHCT116"/> + <option name="GIS RNA hES3" value="wgEncodeGisRnaPetHes3"/> + <option name="GIS RNA MCF7" value="wgEncodeGisRnaPetMCF7"/> + <option name="GIS RNA MCF7 Est" value="wgEncodeGisRnaPetMCF7Estr"/> + </option> + <option name="TFBS Conserved" value="tfbsConsSites"/> + <option name="affyTxnPhase3FragsL" value="subtracks-affyTxnPhase3FragsL"> + <option name="HDF lRNA" value="affyTxnPhase3FragsHDF"/> + <option name="HeLa Cyto lRNA" value="affyTxnPhase3FragsHeLaCyto"/> + <option name="HeLa Nucl lRNA" value="affyTxnPhase3FragsHeLaNuclear"/> + <option name="HepG2 Cyto lRNA" value="affyTxnPhase3FragsHepG2Cyto"/> + <option name="HepG2 Nucl lRNA" value="affyTxnPhase3FragsHepG2Nuclear"/> + <option name="Jurkat lRNA" value="affyTxnPhase3FragsJurkat"/> + <option name="Affy Tx lRNA Reg" value="affyTxnPhase3FragsL"/> + <option name="NCCIT lRNA" value="affyTxnPhase3FragsNCCIT"/> + <option name="PC3 lRNA" value="affyTxnPhase3FragsPC3"/> + <option name="SK-N-AS lRNA" value="affyTxnPhase3FragsSK_N_AS"/> + <option name="U87MG lRNA" value="affyTxnPhase3FragsU87MG"/> + </option> + <option name="ORegAnno" value="oreganno"/> + <option name="Affy U133" value="affyU133"/> + <option name="Eponine TSS" value="eponine"/> + <option name="Allen Brain" value="allenBrainAli"/> + <option name="TS miRNA sites" value="targetScanS"/> + <option name="Bertone Yale TAR" value="yaleBertoneTars"/> + <option name="uppsalaChipSignal" value="subtracks-uppsalaChipSignal"> + <option name="UU H3ac Signal" value="uppsalaChipH3acSignal"/> + <option name="UU ChIP Signal" value="uppsalaChipSignal"/> + <option name="UU Usf1 Signal" value="uppsalaChipUsf1Signal"/> + <option name="UU Usf2 Signal" value="uppsalaChipUsf2Signal"/> + </option> + <option name="Affy U95" value="affyU95"/> + <option name="Uppsala ChIP" value="uppsalaChipSuper"/> + <option name="wgEncodeGisChipPetAll" value="subtracks-wgEncodeGisChipPetAll"> + <option name="p53 HCT116 +5FU" value="wgEncodeGisChipPet"/> + <option name="GIS ChIP-PET" value="wgEncodeGisChipPetAll"/> + <option name="H3K27me3 hES3" value="wgEncodeGisChipPetHes3H3K27me3"/> + <option name="H3K4me3 hES3" value="wgEncodeGisChipPetHes3H3K4me3"/> + <option name="cMyc P493" value="wgEncodeGisChipPetMycP493"/> + <option name="STAT1 HeLa +gIF" value="wgEncodeGisChipPetStat1Gif"/> + <option name="STAT1 HeLa -gIF" value="wgEncodeGisChipPetStat1NoGif"/> + </option> + </option> + <option name="ENCODE Comparative Genomics and Variation" value="group-encodeCompAndVar"> + <option name="NHGRI DIPs" value="encodeIndels"/> + </option> + <option name="Experimental Tracks" value="group-x"> + <option name="Uppsala ChIP" value="encodeUppsalaChip"/> + <option name="cnp" value="subtracks-cnp"> + <option name="Iafrate CNPs" value="cnpIafrate2"/> + <option name="Locke CNPs" value="cnpLocke"/> + <option name="Redon CNPs" value="cnpRedon"/> + <option name="Sebat CNPs" value="cnpSebat2"/> + <option name="Sharp CNPs" value="cnpSharp2"/> + <option name="Tuzun Fosmids" value="cnpTuzun"/> + <option name="Conrad Dels" value="delConrad2"/> + <option name="Hinds Dels" value="delHinds2"/> + <option name="McCarroll Dels" value="delMccarroll"/> + </option> + <option name="encodeUncFaire" value="subtracks-encodeUncFaire"> + <option name="FAIRE PeakFinder" value="encodeUncFairePeaks"/> + <option name="FAIRE ChIPOTle" value="encodeUncFairePeaksChipotle"/> + </option> + <option name="encodeUppsalaChipBut" value="subtracks-encodeUppsalaChipBut"> + <option name="UU H3ac 0h vs 12h" value="encodeUppsalaChipH3acBut0vs12"/> + <option name="UU H4ac 0h vs 12h" value="encodeUppsalaChipH4acBut0vs12"/> + </option> + <option name="UT-Austin STAGE" value="encodeUtexStage"/> + <option name="UW DNase-array" value="encodeRegulomeDnaseArray"/> + <option name="encodeSangerChipHits" value="subtracks-encodeSangerChipHits"> + <option name="SI H3K4m1 GM6990" value="encodeSangerChipCenterH3K4me1GM06990"/> + <option name="SI H3K4me1 HeLa" value="encodeSangerChipCenterH3K4me1HeLa"/> + <option name="SI H3K4m2 GM6990" value="encodeSangerChipCenterH3K4me2GM06990"/> + <option name="SI H3K4me2 HeLa" value="encodeSangerChipCenterH3K4me2HeLa"/> + <option name="SI H3K4me2 K562" value="encodeSangerChipCenterH3K4me2K562"/> + <option name="SI H3K4m3 GM6990" value="encodeSangerChipCenterH3K4me3GM06990"/> + <option name="SI H3K4me3 HeLa" value="encodeSangerChipCenterH3K4me3HeLa"/> + <option name="SI H3K4me3 K562" value="encodeSangerChipCenterH3K4me3K562"/> + <option name="SI H3ac GM06990" value="encodeSangerChipCenterH3acGM06990"/> + <option name="SI H3ac HeLa" value="encodeSangerChipCenterH3acHeLa"/> + <option name="SI H3ac K562" value="encodeSangerChipCenterH3acK562"/> + <option name="SI H4ac GM06990" value="encodeSangerChipCenterH4acGM06990"/> + <option name="SI H4ac HeLa" value="encodeSangerChipCenterH4acHeLa"/> + <option name="SI H4ac K562" value="encodeSangerChipCenterH4acK562"/> + </option> + <option name="Gencode Genes Mar07" value="encodeGencodeGeneMar07"/> + <option name="encodeNhgriDukeDnaseHs off" value="subtracks-encodeNhgriDukeDnaseHs off"> + <option name="DNase CD4 MS" value="encodeNhgriDnaseHsMpssCd4"/> + <option name="DNase CD4-act MS" value="encodeNhgriDnaseHsMpssCd4Act"/> + </option> + <option name="encodeNhgriDukeDnaseHs" value="subtracks-encodeNhgriDukeDnaseHs"> + <option name="DNase CD4 Pval" value="encodeNhgriDnaseHsChipPvalCd4"/> + <option name="DNase GM069 Pval" value="encodeNhgriDnaseHsChipPvalGm06990"/> + <option name="DNase H9 Pval" value="encodeNhgriDnaseHsChipPvalH9"/> + <option name="DNase HeLa Pval" value="encodeNhgriDnaseHsChipPvalHela"/> + <option name="DNase HepG2 Pval" value="encodeNhgriDnaseHsChipPvalHepG2"/> + <option name="DNase IMR90 Pval" value="encodeNhgriDnaseHsChipPvalImr90"/> + <option name="DNase K562 Pval" value="encodeNhgriDnaseHsChipPvalK562"/> + </option> + </option> + <option name="ENCODE Transcript Levels" value="group-encodeTxLevels"> + <option name="encodeYaleAffyRNATars" value="subtracks-encodeYaleAffyRNATars"> + <option name="Yale TAR NB4 RA" value="encodeYaleAffyNB4RARNATars"/> + <option name="Yale TAR NB4 TPA" value="encodeYaleAffyNB4TPARNATars"/> + <option name="Yale TAR NB4 Un" value="encodeYaleAffyNB4UntrRNATars"/> + <option name="Yale TAR Neutro" value="encodeYaleAffyNeutRNATars"/> + <option name="Yale TAR Plcnta" value="encodeYaleAffyPlacRNATars"/> + <option name="Yale TAR" value="encodeYaleAffyRNATars"/> + </option> + <option name="encodeYaleAffyRNATransMap" value="subtracks-encodeYaleAffyRNATransMap"> + <option name="Yale RNA NB4 RA" value="encodeYaleAffyNB4RARNATransMap"/> + <option name="Yale RNA NB4 TPA" value="encodeYaleAffyNB4TPARNATransMap"/> + <option name="Yale RNA NB4 Un" value="encodeYaleAffyNB4UntrRNATransMap"/> + <option name="Yale RNA Neutro" value="encodeYaleAffyNeutRNATransMap"/> + <option name="Yale RNA Plcnta" value="encodeYaleAffyPlacRNATransMap"/> + <option name="Yale RNA" value="encodeYaleAffyRNATransMap"/> + </option> + <option name="encodeAffyRnaSignal" value="subtracks-encodeAffyRnaSignal"> + <option name="Affy RNA GM06990" value="encodeAffyRnaGm06990Signal"/> + <option name="Affy RNA HeLa" value="encodeAffyRnaHeLaSignal"/> + <option name="Affy RNA RA 0h" value="encodeAffyRnaHl60SignalHr00"/> + <option name="Affy RNA RA 2h" value="encodeAffyRnaHl60SignalHr02"/> + <option name="Affy RNA RA 8h" value="encodeAffyRnaHl60SignalHr08"/> + <option name="Affy RNA RA 32h" value="encodeAffyRnaHl60SignalHr32"/> + <option name="Affy RNA Signal" value="encodeAffyRnaSignal"/> + </option> + <option name="encodeYaleMASPlacRNATransMap" value="subtracks-encodeYaleMASPlacRNATransMap"> + <option name="Yale NB4 NgF RNA" value="encodeYaleMASNB4RNANprotTMFWDMless36mer36bp"/> + <option name="Yale NB4 NgR RNA" value="encodeYaleMASNB4RNANprotTMREVMless36mer36bp"/> + <option name="Yale Plc NgF RNA" value="encodeYaleMASPlacRNANprotTMFWDMless36mer36bp"/> + <option name="Yale Plc NgR RNA" value="encodeYaleMASPlacRNANprotTMREVMless36mer36bp"/> + <option name="Yale MAS RNA" value="encodeYaleMASPlacRNATransMap"/> + <option name="Yale Plc BtF RNA" value="encodeYaleMASPlacRNATransMapFwdMless36mer36bp"/> + <option name="Yale Plc BtR RNA" value="encodeYaleMASPlacRNATransMapRevMless36mer36bp"/> + </option> + <option name="encodeBuFirstExon" value="subtracks-encodeBuFirstExon"> + <option name="BU First Exon" value="encodeBuFirstExon"/> + <option name="BU Cere. Cortex" value="encodeBuFirstExonCerebrum"/> + <option name="BU Colon" value="encodeBuFirstExonColon"/> + <option name="BU Heart" value="encodeBuFirstExonHeart"/> + <option name="BU Kidney" value="encodeBuFirstExonKidney"/> + <option name="BU Liver" value="encodeBuFirstExonLiver"/> + <option name="BU Lung" value="encodeBuFirstExonLung"/> + <option name="BU Skel. Muscle" value="encodeBuFirstExonSkMuscle"/> + <option name="BU Spleen" value="encodeBuFirstExonSpleen"/> + <option name="BU Stomach" value="encodeBuFirstExonStomach"/> + <option name="BU Testis" value="encodeBuFirstExonTestis"/> + </option> + <option name="encodeAffyEcSites" value="subtracks-encodeAffyEcSites"> + <option name="EC1 Sites BrainC" value="encodeAffyEc1BrainCerebellumSites"/> + <option name="EC1 Sites BrainF" value="encodeAffyEc1BrainFrontalLobeSites"/> + <option name="EC1 Sites Hippoc" value="encodeAffyEc1BrainHippocampusSites"/> + <option name="EC1 Sites BrainH" value="encodeAffyEc1BrainHypothalamusSites"/> + <option name="EC1 Sites FetalK" value="encodeAffyEc1FetalKidneySites"/> + <option name="EC1 Sites Spleen" value="encodeAffyEc1FetalSpleenSites"/> + <option name="EC1 Sites FetalT" value="encodeAffyEc1FetalTestisSites"/> + <option name="EC1 Sites GM0699" value="encodeAffyEc1GM06990Sites"/> + <option name="EC1 Sites HeLa" value="encodeAffyEc1HeLaC1S3Sites"/> + <option name="EC1 Sites HepG2" value="encodeAffyEc1HepG2Sites"/> + <option name="EC1 Sites K562" value="encodeAffyEc1K562Sites"/> + <option name="EC1 Sites Ovary" value="encodeAffyEc1OvarySites"/> + <option name="EC1 Sites Placen" value="encodeAffyEc1PlacentaSites"/> + <option name="EC1 Sites Prost" value="encodeAffyEc1ProstateSites"/> + <option name="EC1 Sites TertBJ" value="encodeAffyEc1TertBJSites"/> + <option name="EC1 Sites Testis" value="encodeAffyEc1TestisSites"/> + <option name="EC51 Sites BrainC" value="encodeAffyEc51BrainCerebellumSites"/> + <option name="EC51 Site BrainF" value="encodeAffyEc51BrainFrontalLobeSites"/> + <option name="EC51 Site Hippoc" value="encodeAffyEc51BrainHippocampusSites"/> + <option name="EC51 Sites BrainH" value="encodeAffyEc51BrainHypothalamusSites"/> + <option name="EC51 Site FetalK" value="encodeAffyEc51FetalKidneySites"/> + <option name="EC51 Site Spleen" value="encodeAffyEc51FetalSpleenSites"/> + <option name="EC51 Site FetalT" value="encodeAffyEc51FetalTestisSites"/> + <option name="EC51 Site GM0699" value="encodeAffyEc51GM06990Sites"/> + <option name="EC51 Site HeLa" value="encodeAffyEc51HeLaC1S3Sites"/> + <option name="EC51 Site HepG2" value="encodeAffyEc51HepG2Sites"/> + <option name="EC51 Site K562" value="encodeAffyEc51K562Sites"/> + <option name="EC51 Site Ovary" value="encodeAffyEc51OvarySites"/> + <option name="EC51 Site Placen" value="encodeAffyEc51PlacentaSites"/> + <option name="EC51 Site Prost" value="encodeAffyEc51ProstateSites"/> + <option name="EC51 Site TertBJ" value="encodeAffyEc51TertBJSites"/> + <option name="EC51 Site Testis" value="encodeAffyEc51TestisSites"/> + <option name="Affy EC Sites" value="encodeAffyEcSites"/> + </option> + <option name="encodeStanfordPromoters" value="subtracks-encodeStanfordPromoters"> + <option name="Stanf Promoter" value="encodeStanfordPromoters"/> + <option name="Stan Pro AGS" value="encodeStanfordPromotersAGS"/> + <option name="Stan Pro Average" value="encodeStanfordPromotersAverage"/> + <option name="Stan Pro Be2c" value="encodeStanfordPromotersBe2C"/> + <option name="Stan Pro CRL1690" value="encodeStanfordPromotersCRL1690"/> + <option name="Stan Pro G402" value="encodeStanfordPromotersG402"/> + <option name="Stan Pro HCT116" value="encodeStanfordPromotersHCT116"/> + <option name="Stan Pro HMCB" value="encodeStanfordPromotersHMCB"/> + <option name="Stan Pro HT1080" value="encodeStanfordPromotersHT1080"/> + <option name="Stan Pro HTB11" value="encodeStanfordPromotersHTB11"/> + <option name="Stan Pro Hela" value="encodeStanfordPromotersHela"/> + <option name="Stan Pro HepG2" value="encodeStanfordPromotersHepG2"/> + <option name="Stan Pro JEG3" value="encodeStanfordPromotersJEG3"/> + <option name="Stan Pro MG63" value="encodeStanfordPromotersMG63"/> + <option name="Stan Pro MRC5" value="encodeStanfordPromotersMRC5"/> + <option name="Stan Pro Panc1" value="encodeStanfordPromotersPanc1"/> + <option name="Stan Pro Snu182" value="encodeStanfordPromotersSnu182"/> + <option name="Stan Pro U87" value="encodeStanfordPromotersU87"/> + </option> + <option name="Affy RNA" value="encodeAffyRnaSuper"/> + <option name="Yale RNA" value="encodeYaleRnaSuper"/> + <option name="encodeAffyEcSignal" value="subtracks-encodeAffyEcSignal"> + <option name="EC1 Sgnl BrainC" value="encodeAffyEc1BrainCerebellumSignal"/> + <option name="EC1 Sgnl BrainF" value="encodeAffyEc1BrainFrontalLobeSignal"/> + <option name="EC1 Sgnl Hippoc" value="encodeAffyEc1BrainHippocampusSignal"/> + <option name="EC1 Sgnl BrainH" value="encodeAffyEc1BrainHypothalamusSignal"/> + <option name="EC1 Sgnl FetalK" value="encodeAffyEc1FetalKidneySignal"/> + <option name="EC1 Sgnl Spleen" value="encodeAffyEc1FetalSpleenSignal"/> + <option name="EC1 Sgnl FetalT" value="encodeAffyEc1FetalTestisSignal"/> + <option name="EC1 Sgnl GM0699" value="encodeAffyEc1GM06990Signal"/> + <option name="EC1 Sgnl HeLa" value="encodeAffyEc1HeLaC1S3Signal"/> + <option name="EC1 Sgnl HepG2" value="encodeAffyEc1HepG2Signal"/> + <option name="EC1 Sgnl K562" value="encodeAffyEc1K562Signal"/> + <option name="EC1 Sgnl Ovary" value="encodeAffyEc1OvarySignal"/> + <option name="EC1 Sgnl Placen" value="encodeAffyEc1PlacentaSignal"/> + <option name="EC1 Sgnl Prost" value="encodeAffyEc1ProstateSignal"/> + <option name="EC1 Sgnl TertBJ" value="encodeAffyEc1TertBJSignal"/> + <option name="EC1 Sgnl Testis" value="encodeAffyEc1TestisSignal"/> + <option name="EC51 Sgnl BrainC" value="encodeAffyEc51BrainCerebellumSignal"/> + <option name="EC51 Sgnl BrainF" value="encodeAffyEc51BrainFrontalLobeSignal"/> + <option name="EC51 Sgnl Hippoc" value="encodeAffyEc51BrainHippocampusSignal"/> + <option name="EC51 Sgnl BrainH" value="encodeAffyEc51BrainHypothalamusSignal"/> + <option name="EC51 Sgnl FetalK" value="encodeAffyEc51FetalKidneySignal"/> + <option name="EC51 Sgnl Spleen" value="encodeAffyEc51FetalSpleenSignal"/> + <option name="EC51 Sgnl FetalT" value="encodeAffyEc51FetalTestisSignal"/> + <option name="EC51 Sgnl GM0699" value="encodeAffyEc51GM06990Signal"/> + <option name="EC51 Sgnl HeLa" value="encodeAffyEc51HeLaC1S3Signal"/> + <option name="EC51 Sgnl HepG2" value="encodeAffyEc51HepG2Signal"/> + <option name="EC51 Sgnl K562" value="encodeAffyEc51K562Signal"/> + <option name="EC51 Sgnl Ovary" value="encodeAffyEc51OvarySignal"/> + <option name="EC51 Sgnl Placen" value="encodeAffyEc51PlacentaSignal"/> + <option name="EC51 Sgnl Prost" value="encodeAffyEc51ProstateSignal"/> + <option name="EC51 Sgnl TertBJ" value="encodeAffyEc51TertBJSignal"/> + <option name="EC51 Sgnl Testis" value="encodeAffyEc51TestisSignal"/> + <option name="Affy EC Signal" value="encodeAffyEcSignal"/> + </option> + <option name="Stanf RTPCR" value="encodeStanfordRtPcr"/> + <option name="encodeAffyRnaTransfrags" value="subtracks-encodeAffyRnaTransfrags"> + <option name="Affy RNA GM06990" value="encodeAffyRnaGm06990Sites"/> + <option name="Affy RNA HeLa" value="encodeAffyRnaHeLaSites"/> + <option name="Affy RNA RA 0h" value="encodeAffyRnaHl60SitesHr00"/> + <option name="Affy RNA RA 2h" value="encodeAffyRnaHl60SitesHr02"/> + <option name="Affy RNA RA 8h" value="encodeAffyRnaHl60SitesHr08"/> + <option name="Affy RNA RA 32h" value="encodeAffyRnaHl60SitesHr32"/> + <option name="Affy Transfrags" value="encodeAffyRnaTransfrags"/> + </option> + <option name="encodeYaleMASPlacRNATars" value="subtracks-encodeYaleMASPlacRNATars"> + <option name="Yale NB4 NgF TAR" value="encodeYaleMASNB4RNANProtTarsFWDMless36mer36bp"/> + <option name="Yale NB4 NgR TAR" value="encodeYaleMASNB4RNANProtTarsREVMless36mer36bp"/> + <option name="Yale Plc NgF TAR" value="encodeYaleMASPlacRNANprotTarsFWDMless36mer36bp"/> + <option name="Yale Plc NgR TAR" value="encodeYaleMASPlacRNANprotTarsREVMless36mer36bp"/> + <option name="Yale MAS TAR" value="encodeYaleMASPlacRNATars"/> + <option name="Yale Plc BtF TAR" value="encodeYaleMASPlacRNATarsFwdMless36mer36bp"/> + <option name="Yale Plc BtR TAR" value="encodeYaleMASPlacRNATarsRevMless36mer36bp"/> + </option> + <option name="Affy EC" value="encodeAffyEcSuper"/> + <option name="encodeRikenCage" value="subtracks-encodeRikenCage"> + <option name="Riken CAGE" value="encodeRikenCage"/> + <option name="Riken CAGE -" value="encodeRikenCageMinus"/> + <option name="Riken CAGE +" value="encodeRikenCagePlus"/> + </option> + </option> + <option name="ENCODE Chromatin Immunoprecipitation" value="group-encodeChip"> + <option name="encodeAffyChIpHl60SignalStrict" value="subtracks-encodeAffyChIpHl60SignalStrict"> + <option name="Affy Strict Sig" value="encodeAffyChIpHl60SignalStrict"/> + <option name="Affy H3K9ac2 0h" value="encodeAffyChIpHl60SignalStrictH3K9K14DHr00"/> + <option name="Affy H3K9ac2 2h" value="encodeAffyChIpHl60SignalStrictH3K9K14DHr02"/> + <option name="Affy H3K9ac2 8h" value="encodeAffyChIpHl60SignalStrictH3K9K14DHr08"/> + <option name="Affy H3K9ac2 32h" value="encodeAffyChIpHl60SignalStrictH3K9K14DHr32"/> + <option name="Affy H4Kac4 0h" value="encodeAffyChIpHl60SignalStrictHisH4Hr00"/> + <option name="Affy H4Kac4 2h" value="encodeAffyChIpHl60SignalStrictHisH4Hr02"/> + <option name="Affy H4Kac4 8h" value="encodeAffyChIpHl60SignalStrictHisH4Hr08"/> + <option name="Affy H4Kac4 32h" value="encodeAffyChIpHl60SignalStrictHisH4Hr32"/> + <option name="Affy Pol2 0h" value="encodeAffyChIpHl60SignalStrictPol2Hr00"/> + <option name="Affy Pol2 2h" value="encodeAffyChIpHl60SignalStrictPol2Hr02"/> + <option name="Affy Pol2 8h" value="encodeAffyChIpHl60SignalStrictPol2Hr08"/> + <option name="Affy Pol2 32h" value="encodeAffyChIpHl60SignalStrictPol2Hr32"/> + <option name="Affy p63 ME-180+" value="encodeAffyChIpHl60SignalStrictp63_ActD"/> + <option name="Affy p63 ME-180" value="encodeAffyChIpHl60SignalStrictp63_mActD"/> + </option> + <option name="Stanf ChIP" value="encodeStanfordChipSuper"/> + <option name="encodeYaleChIPSTAT1Pval" value="subtracks-encodeYaleChIPSTAT1Pval"> + <option name="Yale LI PVal" value="encodeYaleChIPSTAT1HeLaBingRenPval"/> + <option name="Yale 36-36 PVal" value="encodeYaleChIPSTAT1HeLaMaskLess36mer36bpPval"/> + <option name="Yale 50-38 PVal" value="encodeYaleChIPSTAT1HeLaMaskLess50mer38bpPval"/> + <option name="Yale 50-50 PVal" value="encodeYaleChIPSTAT1HeLaMaskLess50mer50bpPval"/> + <option name="Yale STAT1 pVal" value="encodeYaleChIPSTAT1Pval"/> + </option> + <option name="encodeUtexStage" value="subtracks-encodeUtexStage"> + <option name="UT-Austin STAGE" value="encodeUtexStage"/> + <option name="UT Myc HeLa Tags" value="encodeUtexStageCMycHelaTags"/> + <option name="UT STAT1 HeLa Tags" value="encodeUtexStageStat1HelaTags"/> + </option> + <option name="Sanger ChIP-chip" value="encodeSangerChipSuper"/> + <option name="encodeLIChIP" value="subtracks-encodeLIChIP"> + <option name="LI ChIP Various" value="encodeLIChIP"/> + <option name="LI H3ac IMR90" value="encodeUcsdChipAch3Imr90_f"/> + <option name="LI H3K27me3 HeLa" value="encodeUcsdChipH3K27me3"/> + <option name="LI SUZ12 HeLa" value="encodeUcsdChipH3K27me3Suz12"/> + <option name="LI H3K4me2 IMR90" value="encodeUcsdChipMeh3k4Imr90_f"/> + <option name="LI Pol2 HCT116" value="encodeUcsdChipRnapHct116_f"/> + <option name="LI Pol2 HeLa" value="encodeUcsdChipRnapHela_f"/> + <option name="LI Pol2 IMR90" value="encodeUcsdChipRnapImr90_f"/> + <option name="LI Pol2 THP1" value="encodeUcsdChipRnapThp1_f"/> + <option name="LI TAF1 HCT116" value="encodeUcsdChipTaf250Hct116_f"/> + <option name="LI TAF1 HeLa" value="encodeUcsdChipTaf250Hela_f"/> + <option name="LI TAF1 IMR90" value="encodeUcsdChipTaf250Imr90_f"/> + <option name="LI TAF1 THP1" value="encodeUcsdChipTaf250Thp1_f"/> + </option> + <option name="encodeUtexChip" value="subtracks-encodeUtexChip"> + <option name="UT-Austin ChIP" value="encodeUtexChip"/> + <option name="UT E2F4 st-Fb Pk" value="encodeUtexChip2091fibE2F4Peaks"/> + <option name="UT E2F4 Fb" value="encodeUtexChip2091fibE2F4Raw"/> + <option name="UT Myc Fb Pk" value="encodeUtexChip2091fibMycPeaks"/> + <option name="UT Myc Fb" value="encodeUtexChip2091fibMycRaw"/> + <option name="UT Myc st-Fb Pk" value="encodeUtexChip2091fibMycStimPeaks"/> + <option name="UT Myc st-Fb" value="encodeUtexChip2091fibMycStimRaw"/> + <option name="UT Myc HeLa Pk" value="encodeUtexChipHeLaMycPeaks"/> + <option name="UT Myc HeLa" value="encodeUtexChipHeLaMycRaw"/> + </option> + <option name="encodeYaleChipSig" value="subtracks-encodeYaleChipSig"> + <option name="Yale ChIP Signal" value="encodeYaleChipSig"/> + <option name="YU BAF155 HeLa S" value="encodeYaleChipSignalBaf155"/> + <option name="YU BAF155 K562 S" value="encodeYaleChipSignalBaf155K562"/> + <option name="YU BAF170 HeLa S" value="encodeYaleChipSignalBaf170"/> + <option name="YU BAF170 K562 S" value="encodeYaleChipSignalBaf170K562"/> + <option name="YU BAF47 K562 S" value="encodeYaleChipSignalBaf47K562"/> + <option name="YU c-Fos HeLa S" value="encodeYaleChipSignalFos"/> + <option name="YU H3K27me3 HeLa S" value="encodeYaleChipSignalH3k27me3Hela"/> + <option name="YU H4Kac4 GM S" value="encodeYaleChipSignalH4kac4Gm06990"/> + <option name="YU H4Kac4 HeLa S" value="encodeYaleChipSignalH4kac4Hela"/> + <option name="YU c-Jun HeLa S" value="encodeYaleChipSignalJun"/> + <option name="YU NRSF HeLa S" value="encodeYaleChipSignalNrsfHela"/> + <option name="YU P65-C HeLa TNF S" value="encodeYaleChipSignalP65cHelaTnfa"/> + <option name="YU P65-N HeLa TNF S" value="encodeYaleChipSignalP65nHelaTnfa"/> + <option name="YU Pol2 GM S" value="encodeYaleChipSignalPol2Gm06990"/> + <option name="YU Pol2 HeLa S" value="encodeYaleChipSignalPol2Hela"/> + <option name="YU Pol2N GM S" value="encodeYaleChipSignalPol2nGm06990"/> + <option name="YU Pol2N HeLa S" value="encodeYaleChipSignalPol2nHela"/> + <option name="YU SMARCA4 HeLa S" value="encodeYaleChipSignalSmarca4Hela"/> + <option name="YU SMARCA6 HeLa S" value="encodeYaleChipSignalSmarca6Hela"/> + <option name="YU STAT1 HeLa IF S" value="encodeYaleChipSignalStat1HelaIfna"/> + <option name="YU TAF1 HeLa S" value="encodeYaleChipSignalTaf"/> + </option> + <option name="Uppsala ChIP" value="encodeUppsalaChipSuper"/> + <option name="encodeUppsalaChip" value="subtracks-encodeUppsalaChip"> + <option name="Uppsala ChIP" value="encodeUppsalaChip"/> + <option name="UU H3ac HepG2" value="encodeUppsalaChipAch3"/> + <option name="UU HNF-3b HepG2" value="encodeUppsalaChipHnf3b"/> + <option name="UU HNF-4a HepG2" value="encodeUppsalaChipHnf4a"/> + <option name="UU USF-1 HepG2" value="encodeUppsalaChipUsf1"/> + </option> + <option name="encodeUcDavisChipHits" value="subtracks-encodeUcDavisChipHits"> + <option name="UCD Ng ChIP Hits" value="encodeUcDavisChipHits"/> + <option name="UCD E2F1 Hits" value="encodeUcDavisChipHitsE2F1"/> + <option name="UCD c-Myc Hits" value="encodeUcDavisChipHitsMyc"/> + </option> + <option name="encodeUppsalaChipBut" value="subtracks-encodeUppsalaChipBut"> + <option name="Uppsala ChIP Buty" value="encodeUppsalaChipBut"/> + <option name="UU H3ac HepG2 0h" value="encodeUppsalaChipH3acBut0h"/> + <option name="UU H3ac HepG2 12h" value="encodeUppsalaChipH3acBut12h"/> + <option name="UU H4ac HepG2 0h" value="encodeUppsalaChipH4acBut0h"/> + <option name="UU H4ac HepG2 12h" value="encodeUppsalaChipH4acBut12h"/> + </option> + <option name="encodeYaleChipSites" value="subtracks-encodeYaleChipSites"> + <option name="Yale ChIP Sites" value="encodeYaleChipSites"/> + <option name="YU BAF155 HeLa" value="encodeYaleChipSitesBaf155"/> + <option name="YU BAF155 K562" value="encodeYaleChipSitesBaf155K562"/> + <option name="YU BAF170 HeLa" value="encodeYaleChipSitesBaf170"/> + <option name="YU BAF170 K562" value="encodeYaleChipSitesBaf170K562"/> + <option name="YU BAF47 K562" value="encodeYaleChipSitesBaf47K562"/> + <option name="YU c-Fos HeLa" value="encodeYaleChipSitesFos"/> + <option name="YU H3K27me3 HeLa" value="encodeYaleChipSitesH3k27me3Hela"/> + <option name="YU H4Kac4 GM" value="encodeYaleChipSitesH4kac4Gm06990"/> + <option name="YU H4Kac4 HeLa" value="encodeYaleChipSitesH4kac4Hela"/> + <option name="YU c-Jun HeLa" value="encodeYaleChipSitesJun"/> + <option name="YU NRSF HeLa" value="encodeYaleChipSitesNrsfHela"/> + <option name="YU P65-C HeLa TNF" value="encodeYaleChipSitesP65cHelaTnfa"/> + <option name="YU P65-N HeLa TNF" value="encodeYaleChipSitesP65nHelaTnfa"/> + <option name="YU Pol2 GM" value="encodeYaleChipSitesPol2Gm06990"/> + <option name="YU Pol2 HeLa" value="encodeYaleChipSitesPol2Hela"/> + <option name="YU Pol2N GM" value="encodeYaleChipSitesPol2nGm06990"/> + <option name="YU Pol2N HeLa" value="encodeYaleChipSitesPol2nHela"/> + <option name="YU SMARCA4 HeLa" value="encodeYaleChipSitesSmarca4Hela"/> + <option name="YU SMARCA6 HeLa" value="encodeYaleChipSitesSmarca6Hela"/> + <option name="YU STAT1 HeLa IF" value="encodeYaleChipSitesStat1HelaIfna"/> + <option name="YU TAF1 HeLa" value="encodeYaleChipSitesTaf"/> + </option> + <option name="encodeLIChIPgIF" value="subtracks-encodeLIChIPgIF"> + <option name="LI gIF ChIP" value="encodeLIChIPgIF"/> + <option name="LI Pol2 -gIF" value="encodeUcsdChipHeLaH3H4RNAP_p0"/> + <option name="LI Pol2 +gIF" value="encodeUcsdChipHeLaH3H4RNAP_p30"/> + <option name="LI TAF1 -gIF" value="encodeUcsdChipHeLaH3H4TAF250_p0"/> + <option name="LI TAF1 +gIF" value="encodeUcsdChipHeLaH3H4TAF250_p30"/> + <option name="LI H3ac -gIF" value="encodeUcsdChipHeLaH3H4acH3_p0"/> + <option name="LI H3ac +gIF" value="encodeUcsdChipHeLaH3H4acH3_p30"/> + <option name="LI H4ac -gIF" value="encodeUcsdChipHeLaH3H4acH4_p0"/> + <option name="LI H4ac +gIF" value="encodeUcsdChipHeLaH3H4acH4_p30"/> + <option name="LI H3K4me2 -gIF" value="encodeUcsdChipHeLaH3H4dmH3K4_p0"/> + <option name="LI H3K4me2 +gIF" value="encodeUcsdChipHeLaH3H4dmH3K4_p30"/> + <option name="LI STAT1 -gIF" value="encodeUcsdChipHeLaH3H4stat1_p0"/> + <option name="LI STAT1 +gIF" value="encodeUcsdChipHeLaH3H4stat1_p30"/> + <option name="LI H3K4me3 -gIF" value="encodeUcsdChipHeLaH3H4tmH3K4_p0"/> + <option name="LI H3K4me3 +gIF" value="encodeUcsdChipHeLaH3H4tmH3K4_p30"/> + </option> + <option name="Yale WG ChIP-seq" value="wgEncodeYaleChipSeqSuper"/> + <option name="encodeStanfordChipSmoothed" value="subtracks-encodeStanfordChipSmoothed"> + <option name="Stanf ChIP Score" value="encodeStanfordChipSmoothed"/> + <option name="Stan Sc HCT116 Sp1" value="encodeStanfordChipSmoothedHCT116Sp1"/> + <option name="Stan Sc HCT116 Sp3" value="encodeStanfordChipSmoothedHCT116Sp3"/> + <option name="Stan Sc Jurkat Sp1" value="encodeStanfordChipSmoothedJurkatSp1"/> + <option name="Stan Sc Jurkat Sp3" value="encodeStanfordChipSmoothedJurkatSp3"/> + <option name="Stan Sc K562 Sp1" value="encodeStanfordChipSmoothedK562Sp1"/> + <option name="Stan Sc K562 Sp3" value="encodeStanfordChipSmoothedK562Sp3"/> + </option> + <option name="encodeYaleChIPSTAT1Sites" value="subtracks-encodeYaleChIPSTAT1Sites"> + <option name="Yale LI Sites" value="encodeYaleChIPSTAT1HeLaBingRenSites"/> + <option name="Yale 36-36 Sites" value="encodeYaleChIPSTAT1HeLaMaskLess36mer36bpSite"/> + <option name="Yale 50-38 Sites" value="encodeYaleChIPSTAT1HeLaMaskLess50mer38bpSite"/> + <option name="Yale 50-50 Sites" value="encodeYaleChIPSTAT1HeLaMaskLess50mer50bpSite"/> + <option name="Yale STAT1 Sites" value="encodeYaleChIPSTAT1Sites"/> + </option> + <option name="Affy ChIP" value="encodeAffyChipSuper"/> + <option name="encodeStanfordChip" value="subtracks-encodeStanfordChip"> + <option name="Stanf ChIP" value="encodeStanfordChip"/> + <option name="Stan HCT116 Sp1" value="encodeStanfordChipHCT116Sp1"/> + <option name="Stan HCT116 Sp3" value="encodeStanfordChipHCT116Sp3"/> + <option name="Stan Jurkat Sp1" value="encodeStanfordChipJurkatSp1"/> + <option name="Stan Jurkat Sp3" value="encodeStanfordChipJurkatSp3"/> + <option name="Stan K562 Sp1" value="encodeStanfordChipK562Sp1"/> + <option name="Stan K562 Sp3" value="encodeStanfordChipK562Sp3"/> + </option> + <option name="encodeAffyChIpHl60SitesStrict" value="subtracks-encodeAffyChIpHl60SitesStrict"> + <option name="Affy Strict Sites" value="encodeAffyChIpHl60SitesStrict"/> + <option name="Affy H3K9ac2 0h" value="encodeAffyChIpHl60SitesStrictH3K9K14DHr00"/> + <option name="Affy H3K9ac2 2h" value="encodeAffyChIpHl60SitesStrictH3K9K14DHr02"/> + <option name="Affy H3K9ac2 8h" value="encodeAffyChIpHl60SitesStrictH3K9K14DHr08"/> + <option name="Affy H3K9ac2 32h" value="encodeAffyChIpHl60SitesStrictH3K9K14DHr32"/> + <option name="Affy H4Kac4 0h" value="encodeAffyChIpHl60SitesStrictHisH4Hr00"/> + <option name="Affy H4Kac4 2h" value="encodeAffyChIpHl60SitesStrictHisH4Hr02"/> + <option name="Affy H4Kac4 8h" value="encodeAffyChIpHl60SitesStrictHisH4Hr08"/> + <option name="Affy H4Kac4 32h" value="encodeAffyChIpHl60SitesStrictHisH4Hr32"/> + <option name="Affy p63 ME-180+" value="encodeAffyChIpHl60SitesStrictP63_ActD"/> + <option name="Affy p63 ME-180" value="encodeAffyChIpHl60SitesStrictP63_mActD"/> + <option name="Affy Pol2 0h" value="encodeAffyChIpHl60SitesStrictRnapHr00"/> + <option name="Affy Pol2 2h" value="encodeAffyChIpHl60SitesStrictRnapHr02"/> + <option name="Affy Pol2 8h" value="encodeAffyChIpHl60SitesStrictRnapHr08"/> + <option name="Affy Pol2 32h" value="encodeAffyChIpHl60SitesStrictRnapHr32"/> + </option> + <option name="encodeAffyChIpHl60Pval" value="subtracks-encodeAffyChIpHl60Pval"> + <option name="Affy pVal" value="encodeAffyChIpHl60Pval"/> + <option name="Affy Brg1 RA 0h" value="encodeAffyChIpHl60PvalBrg1Hr00"/> + <option name="Affy Brg1 RA 2h" value="encodeAffyChIpHl60PvalBrg1Hr02"/> + <option name="Affy Brg1 RA 8h" value="encodeAffyChIpHl60PvalBrg1Hr08"/> + <option name="Affy Brg1 RA 32h" value="encodeAffyChIpHl60PvalBrg1Hr32"/> + <option name="Affy CEBPe RA 0h" value="encodeAffyChIpHl60PvalCebpeHr00"/> + <option name="Affy CEBPe RA 2h" value="encodeAffyChIpHl60PvalCebpeHr02"/> + <option name="Affy CEBPe RA 8h" value="encodeAffyChIpHl60PvalCebpeHr08"/> + <option name="Affy CEBPe RA 32h" value="encodeAffyChIpHl60PvalCebpeHr32"/> + <option name="Affy CTCF RA 0h" value="encodeAffyChIpHl60PvalCtcfHr00"/> + <option name="Affy CTCF RA 2h" value="encodeAffyChIpHl60PvalCtcfHr02"/> + <option name="Affy CTCF RA 8h" value="encodeAffyChIpHl60PvalCtcfHr08"/> + <option name="Affy CTCF RA 32h" value="encodeAffyChIpHl60PvalCtcfHr32"/> + <option name="Affy H3K27me3 RA 0h" value="encodeAffyChIpHl60PvalH3K27me3Hr00"/> + <option name="Affy H3K27me3 RA 2h" value="encodeAffyChIpHl60PvalH3K27me3Hr02"/> + <option name="Affy H3K27me3 RA 8h" value="encodeAffyChIpHl60PvalH3K27me3Hr08"/> + <option name="Affy H3K27me3 RA 32h" value="encodeAffyChIpHl60PvalH3K27me3Hr32"/> + <option name="Affy H4Kac4 RA 0h" value="encodeAffyChIpHl60PvalH4Kac4Hr00"/> + <option name="Affy H4Kac4 RA 2h" value="encodeAffyChIpHl60PvalH4Kac4Hr02"/> + <option name="Affy H4Kac4 RA 8h" value="encodeAffyChIpHl60PvalH4Kac4Hr08"/> + <option name="Affy H4Kac4 RA 32h" value="encodeAffyChIpHl60PvalH4Kac4Hr32"/> + <option name="Affy P300 RA 0h" value="encodeAffyChIpHl60PvalP300Hr00"/> + <option name="Affy P300 RA 2h" value="encodeAffyChIpHl60PvalP300Hr02"/> + <option name="Affy P300 RA 8h" value="encodeAffyChIpHl60PvalP300Hr08"/> + <option name="Affy P300 RA 32h" value="encodeAffyChIpHl60PvalP300Hr32"/> + <option name="Affy PU1 RA 0h" value="encodeAffyChIpHl60PvalPu1Hr00"/> + <option name="Affy PU1 RA 2h" value="encodeAffyChIpHl60PvalPu1Hr02"/> + <option name="Affy PU1 RA 8h" value="encodeAffyChIpHl60PvalPu1Hr08"/> + <option name="Affy PU1 RA 32h" value="encodeAffyChIpHl60PvalPu1Hr32"/> + <option name="Affy RARA RA 0h" value="encodeAffyChIpHl60PvalRaraHr00"/> + <option name="Affy RARA RA 2h" value="encodeAffyChIpHl60PvalRaraHr02"/> + <option name="Affy RARA RA 8h" value="encodeAffyChIpHl60PvalRaraHr08"/> + <option name="Affy RARA RA 32h" value="encodeAffyChIpHl60PvalRaraHr32"/> + <option name="Affy Pol2 RA 0h" value="encodeAffyChIpHl60PvalRnapHr00"/> + <option name="Affy Pol2 RA 2h" value="encodeAffyChIpHl60PvalRnapHr02"/> + <option name="Affy Pol2 RA 8h" value="encodeAffyChIpHl60PvalRnapHr08"/> + <option name="Affy Pol2 RA 32h" value="encodeAffyChIpHl60PvalRnapHr32"/> + <option name="Affy SIRT1 RA 0h" value="encodeAffyChIpHl60PvalSirt1Hr00"/> + <option name="Affy SIRT1 RA 2h" value="encodeAffyChIpHl60PvalSirt1Hr02"/> + <option name="Affy SIRT1 RA 8h" value="encodeAffyChIpHl60PvalSirt1Hr08"/> + <option name="Affy SIRT1 RA 32h" value="encodeAffyChIpHl60PvalSirt1Hr32"/> + <option name="Affy TFIIB RA 32h" value="encodeAffyChIpHl60PvalTfiibHr32"/> + </option> + <option name="encodeYaleChipRfbr" value="subtracks-encodeYaleChipRfbr"> + <option name="Yale ChIP RFBR" value="encodeYaleChipRfbr"/> + <option name="Yale RFBR Clusters" value="encodeYaleChipRfbrClusters"/> + <option name="Yale RFBR Deserts" value="encodeYaleChipRfbrDeserts"/> + </option> + <option name="encodeSangerChip" value="subtracks-encodeSangerChip"> + <option name="Sanger ChIP" value="encodeSangerChip"/> + <option name="SI CTCF GM06990" value="encodeSangerChipCTCF"/> + <option name="SI H3K27me3 GM06990" value="encodeSangerChipH3K27me3"/> + <option name="SI H3K36me3 GM06990" value="encodeSangerChipH3K36me3"/> + <option name="SI H3K4m1 GM6990" value="encodeSangerChipH3K4me1"/> + <option name="SI H3K4me1 HFL-1" value="encodeSangerChipH3K4me1HFL1"/> + <option name="SI H3K4me1 HeLa" value="encodeSangerChipH3K4me1HeLa"/> + <option name="SI H3K4me1 MOLT4" value="encodeSangerChipH3K4me1Molt4"/> + <option name="SI H3K4me1 PTR8" value="encodeSangerChipH3K4me1Ptr8"/> + <option name="SI H3K4m2 GM6990" value="encodeSangerChipH3K4me2"/> + <option name="SI H3K4me2 HFL-1" value="encodeSangerChipH3K4me2HFL1"/> + <option name="SI H3K4me2 HeLa" value="encodeSangerChipH3K4me2HeLa"/> + <option name="SI H3K4me2 K562" value="encodeSangerChipH3K4me2K562"/> + <option name="SI H3K4me2 MOLT4" value="encodeSangerChipH3K4me2Molt4"/> + <option name="SI H3K4me2 PTR8" value="encodeSangerChipH3K4me2Ptr8"/> + <option name="SI H3K4m3 GM6990" value="encodeSangerChipH3K4me3"/> + <option name="SI H3K4me3 HFL-1" value="encodeSangerChipH3K4me3HFL1"/> + <option name="SI H3K4me3 HeLa" value="encodeSangerChipH3K4me3HeLa"/> + <option name="SI H3K4me3 K562" value="encodeSangerChipH3K4me3K562"/> + <option name="SI H3K4me3 MOLT4" value="encodeSangerChipH3K4me3Molt4"/> + <option name="SI H3K4me3 PTR8" value="encodeSangerChipH3K4me3Ptr8"/> + <option name="SI H3K79me3 GM06990" value="encodeSangerChipH3K79me3"/> + <option name="SI H3K9me3 GM06990" value="encodeSangerChipH3K9me3"/> + <option name="SI H3ac GM06990" value="encodeSangerChipH3ac"/> + <option name="SI H3ac HFL-1" value="encodeSangerChipH3acHFL1"/> + <option name="SI H3ac HeLa" value="encodeSangerChipH3acHeLa"/> + <option name="SI H3ac K562" value="encodeSangerChipH3acK562"/> + <option name="SI H3ac MOLT4" value="encodeSangerChipH3acMolt4"/> + <option name="SI H4ac GM06990" value="encodeSangerChipH4ac"/> + <option name="SI H4ac HFL-1" value="encodeSangerChipH4acHFL1"/> + <option name="SI H4ac HeLa" value="encodeSangerChipH4acHeLa"/> + <option name="SI H4ac K562" value="encodeSangerChipH4acK562"/> + <option name="SI H4ac MOLT4" value="encodeSangerChipH4acMolt4"/> + </option> + <option name="encodeAffyChIpHl60Sites" value="subtracks-encodeAffyChIpHl60Sites"> + <option name="Affy Sites" value="encodeAffyChIpHl60Sites"/> + <option name="Affy Brg1 RA 0h" value="encodeAffyChIpHl60SitesBrg1Hr00"/> + <option name="Affy Brg1 RA 2h" value="encodeAffyChIpHl60SitesBrg1Hr02"/> + <option name="Affy Brg1 RA 8h" value="encodeAffyChIpHl60SitesBrg1Hr08"/> + <option name="Affy Brg1 RA 32h" value="encodeAffyChIpHl60SitesBrg1Hr32"/> + <option name="Affy CEBPe RA 0h" value="encodeAffyChIpHl60SitesCebpeHr00"/> + <option name="Affy CEBPe RA 2h" value="encodeAffyChIpHl60SitesCebpeHr02"/> + <option name="Affy CEBPe RA 8h" value="encodeAffyChIpHl60SitesCebpeHr08"/> + <option name="Affy CEBPe RA 32h" value="encodeAffyChIpHl60SitesCebpeHr32"/> + <option name="Affy CTCF RA 0h" value="encodeAffyChIpHl60SitesCtcfHr00"/> + <option name="Affy CTCF RA 2h" value="encodeAffyChIpHl60SitesCtcfHr02"/> + <option name="Affy CTCF RA 8h" value="encodeAffyChIpHl60SitesCtcfHr08"/> + <option name="Affy CTCF RA 32h" value="encodeAffyChIpHl60SitesCtcfHr32"/> + <option name="Affy H3K27me3 RA 0h" value="encodeAffyChIpHl60SitesH3K27me3Hr00"/> + <option name="Affy H3K27me3 RA 2h" value="encodeAffyChIpHl60SitesH3K27me3Hr02"/> + <option name="Affy H3K27me3 RA 8h" value="encodeAffyChIpHl60SitesH3K27me3Hr08"/> + <option name="Affy H3K27me3 RA 32h" value="encodeAffyChIpHl60SitesH3K27me3Hr32"/> + <option name="Affy H4Kac4 RA 0h" value="encodeAffyChIpHl60SitesH4Kac4Hr00"/> + <option name="Affy H4Kac4 RA 2h" value="encodeAffyChIpHl60SitesH4Kac4Hr02"/> + <option name="Affy H4Kac4 RA 8h" value="encodeAffyChIpHl60SitesH4Kac4Hr08"/> + <option name="Affy H4Kac4 RA 32h" value="encodeAffyChIpHl60SitesH4Kac4Hr32"/> + <option name="Affy P300 RA 0h" value="encodeAffyChIpHl60SitesP300Hr00"/> + <option name="Affy P300 RA 2h" value="encodeAffyChIpHl60SitesP300Hr02"/> + <option name="Affy P300 RA 8h" value="encodeAffyChIpHl60SitesP300Hr08"/> + <option name="Affy P300 RA 32h" value="encodeAffyChIpHl60SitesP300Hr32"/> + <option name="Affy PU1 RA 0h" value="encodeAffyChIpHl60SitesPu1Hr00"/> + <option name="Affy PU1 RA 2h" value="encodeAffyChIpHl60SitesPu1Hr02"/> + <option name="Affy PU1 RA 8h" value="encodeAffyChIpHl60SitesPu1Hr08"/> + <option name="Affy PU1 RA 32h" value="encodeAffyChIpHl60SitesPu1Hr32"/> + <option name="Affy RARA RA 0h" value="encodeAffyChIpHl60SitesRaraHr00"/> + <option name="Affy RARA RA 2h" value="encodeAffyChIpHl60SitesRaraHr02"/> + <option name="Affy RARA RA 8h" value="encodeAffyChIpHl60SitesRaraHr08"/> + <option name="Affy RARA RA 32h" value="encodeAffyChIpHl60SitesRaraHr32"/> + <option name="Affy Pol2 RA 0h" value="encodeAffyChIpHl60SitesRnapHr00"/> + <option name="Affy Pol2 RA 2h" value="encodeAffyChIpHl60SitesRnapHr02"/> + <option name="Affy Pol2 RA 8h" value="encodeAffyChIpHl60SitesRnapHr08"/> + <option name="Affy Pol2 RA 32h" value="encodeAffyChIpHl60SitesRnapHr32"/> + <option name="Affy SIRT1 RA 0h" value="encodeAffyChIpHl60SitesSirt1Hr00"/> + <option name="Affy SIRT1 RA 2h" value="encodeAffyChIpHl60SitesSirt1Hr02"/> + <option name="Affy SIRT1 RA 8h" value="encodeAffyChIpHl60SitesSirt1Hr08"/> + <option name="Affy SIRT1 RA 32h" value="encodeAffyChIpHl60SitesSirt1Hr32"/> + <option name="Affy TFIIB RA 32h" value="encodeAffyChIpHl60SitesTfiibHr32"/> + </option> + <option name="Yale ChIP" value="encodeYaleChipSuper"/> + <option name="encodeUcsdNgGif" value="subtracks-encodeUcsdNgGif"> + <option name="LI Ng gIF ChIP" value="encodeUcsdNgGif"/> + <option name="LI H3ac -gIF" value="encodeUcsdNgHeLaAcH3_p0"/> + <option name="LI H3ac -gIF Pk" value="encodeUcsdNgHeLaAcH3_p0_peak"/> + <option name="LI H3ac +gIF" value="encodeUcsdNgHeLaAcH3_p30"/> + <option name="LI H3ac +gIF Pk" value="encodeUcsdNgHeLaAcH3_p30_peak"/> + <option name="LI H4ac -gIF" value="encodeUcsdNgHeLaAcH4_p0"/> + <option name="LI H4ac -gIF Pk" value="encodeUcsdNgHeLaAcH4_p0_peak"/> + <option name="LI H3K4me2 -gIF" value="encodeUcsdNgHeLaDmH3K4_p0"/> + <option name="LI H3K4m2 -IF Pk" value="encodeUcsdNgHeLaDmH3K4_p0_peak"/> + <option name="LI H3K4me2 +gIF" value="encodeUcsdNgHeLaDmH3K4_p30"/> + <option name="LI H3K4m2 +IF Pk" value="encodeUcsdNgHeLaDmH3K4_p30_peak"/> + <option name="LI H3K4me3 -gIF" value="encodeUcsdNgHeLaH3K4me3_p0"/> + <option name="LI H3K4m3 +gIF" value="encodeUcsdNgHeLaH3K4me3_p30"/> + <option name="LI Pol2 -gIF" value="encodeUcsdNgHeLaRnap_p0"/> + <option name="LI Pol2 +gIF" value="encodeUcsdNgHeLaRnap_p30"/> + <option name="LI STAT1 +gIF" value="encodeUcsdNgHeLaStat1_p30"/> + <option name="LI STAT1 +gIF Pk" value="encodeUcsdNgHeLaStat1_p30_peak"/> + </option> + <option name="encodeYaleChipPval" value="subtracks-encodeYaleChipPval"> + <option name="Yale ChIP pVal" value="encodeYaleChipPval"/> + <option name="YU BAF155 HeLa P" value="encodeYaleChipPvalBaf155"/> + <option name="YU BAF155 K562 P" value="encodeYaleChipPvalBaf155K562"/> + <option name="YU BAF170 HeLa P" value="encodeYaleChipPvalBaf170"/> + <option name="YU BAF170 K562 P" value="encodeYaleChipPvalBaf170K562"/> + <option name="YU BAF47 K562 P" value="encodeYaleChipPvalBaf47K562"/> + <option name="YU c-Fos HeLa P" value="encodeYaleChipPvalFos"/> + <option name="YU H3K27me3 HeLa P" value="encodeYaleChipPvalH3k27me3Hela"/> + <option name="YU H4Kac4 GM P" value="encodeYaleChipPvalH4kac4Gm06990"/> + <option name="YU H4Kac4 HeLa P" value="encodeYaleChipPvalH4kac4Hela"/> + <option name="YU c-Jun HeLa P" value="encodeYaleChipPvalJun"/> + <option name="YU NRSF HeLa P" value="encodeYaleChipPvalNrsfHela"/> + <option name="YU P65-C HeLa TNF P" value="encodeYaleChipPvalP65cHelaTnfa"/> + <option name="YU P65-N HeLa TNF P" value="encodeYaleChipPvalP65nHelaTnfa"/> + <option name="YU Pol2 GM P" value="encodeYaleChipPvalPol2Gm06990"/> + <option name="YU Pol2 HeLa P" value="encodeYaleChipPvalPol2Hela"/> + <option name="YU Pol2N GM P" value="encodeYaleChipPvalPol2nGm06990"/> + <option name="YU Pol2N HeLa P" value="encodeYaleChipPvalPol2nHela"/> + <option name="YU SMARCA4 HeLa P" value="encodeYaleChipPvalSmarca4Hela"/> + <option name="YU SMARCA6 HeLa P" value="encodeYaleChipPvalSmarca6Hela"/> + <option name="YU STAT1 HeLa IF P" value="encodeYaleChipPvalStat1HelaIfna"/> + <option name="YU TAF1 HeLa P" value="encodeYaleChipPvalTaf"/> + </option> + <option name="UT-Austin ChIP" value="encodeUtexChipSuper"/> + <option name="encodeAffyChIpHl60PvalStrict" value="subtracks-encodeAffyChIpHl60PvalStrict"> + <option name="Affy Strict pVal" value="encodeAffyChIpHl60PvalStrict"/> + <option name="Affy H3K9ac2 0h" value="encodeAffyChIpHl60PvalStrictH3K9K14DHr00"/> + <option name="Affy H3K9ac2 2h" value="encodeAffyChIpHl60PvalStrictH3K9K14DHr02"/> + <option name="Affy H3K9ac2 8h" value="encodeAffyChIpHl60PvalStrictH3K9K14DHr08"/> + <option name="Affy H3K9ac2 32h" value="encodeAffyChIpHl60PvalStrictH3K9K14DHr32"/> + <option name="Affy H4Kac4 0h" value="encodeAffyChIpHl60PvalStrictHisH4Hr00"/> + <option name="Affy H4Kac4 2h" value="encodeAffyChIpHl60PvalStrictHisH4Hr02"/> + <option name="Affy H4Kac4 8h" value="encodeAffyChIpHl60PvalStrictHisH4Hr08"/> + <option name="Affy H4Kac4 32h" value="encodeAffyChIpHl60PvalStrictHisH4Hr32"/> + <option name="Affy Pol2 0h" value="encodeAffyChIpHl60PvalStrictPol2Hr00"/> + <option name="Affy Pol2 2h" value="encodeAffyChIpHl60PvalStrictPol2Hr02"/> + <option name="Affy Pol2 8h" value="encodeAffyChIpHl60PvalStrictPol2Hr08"/> + <option name="Affy Pol2 32h" value="encodeAffyChIpHl60PvalStrictPol2Hr32"/> + <option name="Affy p63 ME-180+" value="encodeAffyChIpHl60PvalStrictp63_ActD"/> + <option name="Affy p63 ME-180" value="encodeAffyChIpHl60PvalStrictp63_mActD"/> + </option> + <option name="UC Davis ChIP" value="encodeUcDavisChipSuper"/> + <option name="encodeYaleChIPSTAT1Sig" value="subtracks-encodeYaleChIPSTAT1Sig"> + <option name="Yale LI Sig" value="encodeYaleChIPSTAT1HeLaBingRenSig"/> + <option name="Yale 36-36 Sig" value="encodeYaleChIPSTAT1HeLaMaskLess36mer36bpSig"/> + <option name="Yale 50-38 Sig" value="encodeYaleChIPSTAT1HeLaMaskLess50mer38bpSig"/> + <option name="Yale 50-50 Sig" value="encodeYaleChIPSTAT1HeLaMaskLess50mer50bpSig"/> + <option name="Yale STAT1 Sig" value="encodeYaleChIPSTAT1Sig"/> + </option> + <option name="encodeUCDavisChip" value="subtracks-encodeUCDavisChip"> + <option name="UCD Ng ChIP" value="encodeUCDavisChip"/> + <option name="UCD C-Myc" value="encodeUCDavisChipMyc"/> + <option name="UCD E2F1" value="encodeUCDavisE2F1Median"/> + <option name="UCD PolII_GM" value="encodeUCDavisPolIIGM"/> + <option name="UCD PolII_HelaS3" value="encodeUCDavisPolIIHelaS3"/> + <option name="UCD Taf_GM" value="encodeUCDavisTafGM"/> + <option name="UCD Taf_HelaS3" value="encodeUCDavisTafHelaS3"/> + </option> + <option name="encodeSangerChipHits" value="subtracks-encodeSangerChipHits"> + <option name="SI H3K4m1 GM6990" value="encodeSangerChipHitH3K4me1GM06990"/> + <option name="SI H3K4me1 HeLa" value="encodeSangerChipHitH3K4me1HeLa"/> + <option name="SI H3K4m2 GM6990" value="encodeSangerChipHitH3K4me2GM06990"/> + <option name="SI H3K4me2 HeLa" value="encodeSangerChipHitH3K4me2HeLa"/> + <option name="SI H3K4me2 K562" value="encodeSangerChipHitH3K4me2K562"/> + <option name="SI H3K4m3 GM6990" value="encodeSangerChipHitH3K4me3GM06990"/> + <option name="SI H3K4me3 HeLa" value="encodeSangerChipHitH3K4me3HeLa"/> + <option name="SI H3K4me3 K562" value="encodeSangerChipHitH3K4me3K562"/> + <option name="SI H3ac GM06990" value="encodeSangerChipHitH3acGM06990"/> + <option name="SI H3ac HeLa" value="encodeSangerChipHitH3acHeLa"/> + <option name="SI H3ac K562" value="encodeSangerChipHitH3acK562"/> + <option name="SI H4ac GM06990" value="encodeSangerChipHitH4acGM06990"/> + <option name="SI H4ac HeLa" value="encodeSangerChipHitH4acHeLa"/> + <option name="SI H4ac K562" value="encodeSangerChipHitH4acK562"/> + <option name="Sanger ChIP Hits" value="encodeSangerChipHits"/> + </option> + <option name="LI/UCSD ChIP" value="encodeUcsdChipSuper"/> + </option> + <option name="ENCODE Chromosome, Chromatin and DNA Structure" value="group-encodeChrom"> + <option name="BU ORChID" value="encodeBUORChID"/> + <option name="encodeUncFaire" value="subtracks-encodeUncFaire"> + <option name="UNC FAIRE" value="encodeUncFaire"/> + <option name="FAIRE Signal" value="encodeUncFaireSignal"/> + </option> + <option name="encodeUvaDnaRepOrigins" value="subtracks-encodeUvaDnaRepOrigins"> + <option name="UVa DNA Rep Ori" value="encodeUvaDnaRepOrigins"/> + <option name="UVa Ori-Bubble HeLa" value="encodeUvaDnaRepOriginsBubbleHela"/> + <option name="UVa Ori-NS GM" value="encodeUvaDnaRepOriginsNSGM"/> + <option name="UVa Ori-NS HeLa" value="encodeUvaDnaRepOriginsNSHela"/> + <option name="UVa Ori-TR50 HeLa" value="encodeUvaDnaRepOriginsTR50Hela"/> + </option> + <option name="UVa DNA Rep TR50" value="encodeUvaDnaRepTr50"/> + <option name="UVa DNA Rep" value="encodeUvaDnaRepSuper"/> + <option name="encodeUvaDnaRepSeg" value="subtracks-encodeUvaDnaRepSeg"> + <option name="UVa DNA Rep Early" value="encodeUvaDnaRepEarly"/> + <option name="UVa DNA Rep Late" value="encodeUvaDnaRepLate"/> + <option name="UVa DNA Rep Mid" value="encodeUvaDnaRepMid"/> + <option name="UVa DNA Rep PanS" value="encodeUvaDnaRepPanS"/> + <option name="UVa DNA Rep Seg" value="encodeUvaDnaRepSeg"/> + </option> + <option name="encodeRegulomeDnaseArray" value="subtracks-encodeRegulomeDnaseArray"> + <option name="UW DNase-array" value="encodeRegulomeDnaseArray"/> + <option name="DnaseI Sens" value="encodeRegulomeDnaseGM06990Sens"/> + </option> + <option name="UW DNase" value="encodeUwDnaseSuper"/> + <option name="encodeUWRegulomeBase" value="subtracks-encodeUWRegulomeBase"> + <option name="UW DNase-QCP" value="encodeUWRegulomeBase"/> + <option name="CD4" value="encodeUWRegulomeBaseCD4"/> + <option name="CaCo2" value="encodeUWRegulomeBaseCaCo2"/> + <option name="CaLU3" value="encodeUWRegulomeBaseCaLU3"/> + <option name="EryAdult" value="encodeUWRegulomeBaseEryAdult"/> + <option name="EryFetal" value="encodeUWRegulomeBaseEryFetal"/> + <option name="GM" value="encodeUWRegulomeBaseGM"/> + <option name="HMEC" value="encodeUWRegulomeBaseHMEC"/> + <option name="HRE" value="encodeUWRegulomeBaseHRE"/> + <option name="HeLa" value="encodeUWRegulomeBaseHeLa"/> + <option name="HepG2" value="encodeUWRegulomeBaseHepG2"/> + <option name="Huh7" value="encodeUWRegulomeBaseHuh7"/> + <option name="K562" value="encodeUWRegulomeBaseK562"/> + <option name="NHBE" value="encodeUWRegulomeBaseNHBE"/> + <option name="PANC" value="encodeUWRegulomeBasePANC"/> + <option name="SAEC" value="encodeUWRegulomeBaseSAEC"/> + <option name="SKnSH" value="encodeUWRegulomeBaseSKnSH"/> + </option> + <option name="encodeNhgriDukeDnaseHs" value="subtracks-encodeNhgriDukeDnaseHs"> + <option name="DNase CD4 Raw" value="encodeNhgriDnaseHsChipRawCd4"/> + <option name="DNase GM069 Raw" value="encodeNhgriDnaseHsChipRawGm06990"/> + <option name="DNase H9 Raw" value="encodeNhgriDnaseHsChipRawH9"/> + <option name="DNase HeLa Raw" value="encodeNhgriDnaseHsChipRawHela"/> + <option name="DNase HepG2 Raw" value="encodeNhgriDnaseHsChipRawHepG2"/> + <option name="DNase IMR90 Raw" value="encodeNhgriDnaseHsChipRawImr90"/> + <option name="DNase K562 Raw" value="encodeNhgriDnaseHsChipRawK562"/> + <option name="Duke/NHGRI DNase" value="encodeNhgriDukeDnaseHs"/> + </option> + <option name="encodeUvaDnaRep" value="subtracks-encodeUvaDnaRep"> + <option name="UVa DNA Rep" value="encodeUvaDnaRep"/> + <option name="UVa DNA Rep 0h" value="encodeUvaDnaRep0"/> + <option name="UVa DNA Rep 2h" value="encodeUvaDnaRep2"/> + <option name="UVa DNA Rep 4h" value="encodeUvaDnaRep4"/> + <option name="UVa DNA Rep 6h" value="encodeUvaDnaRep6"/> + <option name="UVa DNA Rep 8h" value="encodeUvaDnaRep8"/> + </option> + </option> + <option name="ENCODE Regions and Genes" value="group-encodeGenes"> + <option name="encodeGencodeGeneMar07" value="subtracks-encodeGencodeGeneMar07"> + <option name="Gencode Ref" value="encodeGencodeGeneKnownMar07"/> + <option name="Gencode Genes Mar07" value="encodeGencodeGeneMar07"/> + <option name="Gencode Polymorph" value="encodeGencodeGenePolymorphicMar07"/> + <option name="Gencode Pseudo" value="encodeGencodeGenePseudoMar07"/> + <option name="Gencode Putative" value="encodeGencodeGenePutativeMar07"/> + </option> + <option name="Vienna RNAz" value="encodeUViennaRnaz"/> + <option name="Gencode Genes" value="encodeGencodeSuper"/> + <option name="EGASP" value="encodeEgaspSuper"/> + <option name="encodeGencodeRaceFrags" value="subtracks-encodeGencodeRaceFrags"> + <option name="Gencode RACEfrags" value="encodeGencodeRaceFrags"/> + <option name="RACEfrags Brain" value="encodeGencodeRaceFragsBrain"/> + <option name="RACEfrags Colon" value="encodeGencodeRaceFragsColon"/> + <option name="RACEfrags GM06990" value="encodeGencodeRaceFragsGM06990"/> + <option name="RACEfrags HL60" value="encodeGencodeRaceFragsHL60"/> + <option name="RACEfrags Heart" value="encodeGencodeRaceFragsHeart"/> + <option name="RACEfrags HeLaS3" value="encodeGencodeRaceFragsHela"/> + <option name="RACEfrags Kidney" value="encodeGencodeRaceFragsKidney"/> + <option name="RACEfrags Liver" value="encodeGencodeRaceFragsLiver"/> + <option name="RACEfrags Lung" value="encodeGencodeRaceFragsLung"/> + <option name="RACEfrags Muscle" value="encodeGencodeRaceFragsMuscle"/> + <option name="RACEfrags Placenta" value="encodeGencodeRaceFragsPlacenta"/> + <option name="RACEfrags Primer" value="encodeGencodeRaceFragsPrimer"/> + <option name="RACEfrags Sm Int" value="encodeGencodeRaceFragsSmallIntest"/> + <option name="RACEfrags Spleen" value="encodeGencodeRaceFragsSpleen"/> + <option name="RACEfrags Stomach" value="encodeGencodeRaceFragsStomach"/> + <option name="RACEfrags Testis" value="encodeGencodeRaceFragsTestis"/> + </option> + <option name="Known+Pred RNA" value="encodeRna"/> + <option name="encodeEgaspFull" value="subtracks-encodeEgaspFull"> + <option name="EGASP Full" value="encodeEgaspFull"/> + <option name="AceView" value="encodeEgaspFullAceview"/> + <option name="DOGFISH-C" value="encodeEgaspFullDogfish"/> + <option name="Ensembl" value="encodeEgaspFullEnsembl"/> + <option name="Ensembl Pseudo" value="encodeEgaspFullEnsemblPseudo"/> + <option name="Exogean" value="encodeEgaspFullExogean"/> + <option name="ExonHunter" value="encodeEgaspFullExonhunter"/> + <option name="Fgenesh++" value="encodeEgaspFullFgenesh"/> + <option name="GeneID" value="encodeEgaspFullGeneId"/> + <option name="GeneID U12" value="encodeEgaspFullGeneIdU12"/> + <option name="GeneMark" value="encodeEgaspFullGenemark"/> + <option name="Jigsaw" value="encodeEgaspFullJigsaw"/> + <option name="Pairgn/NSCAN-E/+" value="encodeEgaspFullPairagonAny"/> + <option name="Pairgn/NSCAN-E" value="encodeEgaspFullPairagonMrna"/> + <option name="NSCAN" value="encodeEgaspFullPairagonMultiple"/> + <option name="SGP2" value="encodeEgaspFullSgp2"/> + <option name="SGP2 U12" value="encodeEgaspFullSgp2U12"/> + <option name="Fgenesh Pseudo" value="encodeEgaspFullSoftberryPseudo"/> + <option name="SPIDA Exons" value="encodeEgaspFullSpida"/> + <option name="Twinscan" value="encodeEgaspFullTwinscan"/> + </option> + <option name="encodeGencodeGeneOct05" value="subtracks-encodeGencodeGeneOct05"> + <option name="Gencode Ref" value="encodeGencodeGeneKnownOct05"/> + <option name="Gencode Genes Oct05" value="encodeGencodeGeneOct05"/> + <option name="Gencode Pseudo" value="encodeGencodeGenePseudoOct05"/> + <option name="Gencode Putative" value="encodeGencodeGenePutativeOct05"/> + </option> + <option name="Gencode Introns Oct05" value="encodeGencodeIntronOct05"/> + <option name="encodePseudogene" value="subtracks-encodePseudogene"> + <option name="Pseudogenes" value="encodePseudogene"/> + <option name="Consensus Pseudogenes" value="encodePseudogeneConsensus"/> + <option name="GIS Pseudogenes" value="encodePseudogeneGIS"/> + <option name="Havana-Gencode Pseudogenes" value="encodePseudogeneHavana"/> + <option name="UCSC Retrogenes" value="encodePseudogeneUcsc"/> + <option name="UCSC Pseudogenes" value="encodePseudogeneUcsc2"/> + <option name="Yale Pseudogenes" value="encodePseudogeneYale"/> + </option> + <option name="ENCODE Regions" value="encodeRegions"/> + <option name="encodeEgaspUpdate" value="subtracks-encodeEgaspUpdate"> + <option name="Augustus Update" value="encodeEgaspUpdAugustusAbinitio"/> + <option name="August/EST/Ms Upd" value="encodeEgaspUpdAugustusAny"/> + <option name="August/Mouse Upd" value="encodeEgaspUpdAugustusDual"/> + <option name="Augustus/EST Upd" value="encodeEgaspUpdAugustusEst"/> + <option name="Exogean Update" value="encodeEgaspUpdExogean"/> + <option name="FGenesh++ Upd" value="encodeEgaspUpdFgenesh"/> + <option name="GeneID Update" value="encodeEgaspUpdGeneId"/> + <option name="GeneID U12 Upd" value="encodeEgaspUpdGeneIdU12"/> + <option name="Jigsaw Update" value="encodeEgaspUpdJigsaw"/> + <option name="SGP2 Update" value="encodeEgaspUpdSgp2"/> + <option name="SGP2 U12 Update" value="encodeEgaspUpdSgp2U12"/> + <option name="Yale Pseudo Upd" value="encodeEgaspUpdYalePseudo"/> + <option name="EGASP Update" value="encodeEgaspUpdate"/> + </option> + <option name="encodeEgaspPartial" value="subtracks-encodeEgaspPartial"> + <option name="ACEScan Cons Alt" value="encodeEgaspPartAceCons"/> + <option name="ACEScan Other" value="encodeEgaspPartAceOther"/> + <option name="Augustus" value="encodeEgaspPartAugustusAbinitio"/> + <option name="Augustus/EST/Mouse" value="encodeEgaspPartAugustusAny"/> + <option name="Augustus/Mouse" value="encodeEgaspPartAugustusDual"/> + <option name="Augustus/EST" value="encodeEgaspPartAugustusEst"/> + <option name="GeneZilla" value="encodeEgaspPartGenezilla"/> + <option name="SAGA" value="encodeEgaspPartSaga"/> + <option name="EGASP Partial" value="encodeEgaspPartial"/> + </option> + </option> + </options> +</filter>